| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Nham_3611 |
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| Symbol | |
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| ID | 4030380 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nitrobacter hamburgensis X14 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007964 |
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| Strand | - |
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| Start bp | 3975139 |
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| End bp | 3976026 |
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| Gene Length | 888 bp |
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| Protein Length | 295 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 637972022 |
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| Product | secretion protein HlyD |
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| Protein accession | YP_578799 |
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| Protein GI | 92119070 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0845] Membrane-fusion protein |
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| TIGRFAM ID | [TIGR01730] RND family efflux transporter, MFP subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.711693 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCGTGAGG TCGCCTCCGG CCTGTTGTTC GGCGTGCTGG CGGTAACGAT CGGTGTCGTG
AGCCCGTCGC GGGCCGCCGA CGACGGCGGG CCGTCCGGAG GCGCTCTCGT GACCGTCGCC
CGCGCGACCA ACGCCTGCTT TTCCGACATG GTCCGTGTGA CCGGCTTCGT CGTCCCGCGC
CGGGAAGCGG TGGTCAGCCC GGACCATGAG GGGTCGCGCG TGACCGACGT GCTGGTCCGC
GAGGGCGACA TCGTCACGCT GAATCAGGAA CTGGCGAAGC TGACGCCGCC GCCCGGCAGC
AAATCGGGAT CGGTGGTCCT GCGCGCGCCC GCGGCCGGAC TCCTCACCCA GGTTCGCACC
GCCGTCGGGG CACTGGCTTC GCCGCAGGCC GGGCCGATGT TTCGAATCGC GATCAACAAT
GAGGTTGAGC TGGATGCCGA GGTGCCATCG ATCCATATAC TCAAGCTCAA TCCGGGCGCG
AGCGCGCGCA TCAGCCGCGA GGACGGGCCC GATCTGGTCG GGAGCGTCCG GCTGGTGTCG
CCCGAGATCG ATCGCAAGAC CCAGATGGGT CACGTCCGGC TGTCCCTGAG CGCGGATCCG
ACTTTGCGGA TAGGAATGTT CGCCCGCGTC AGCATCGACG CCAGGCGCAG TTGCGGCGTG
GCCGTTCCCC GCTCCGCGAT CGATCGCCTG ACGGTTCAGG TGGTGAACGG AAATATCGTG
GAGACGCGAC GCGTCCGCGT CGGATTGACG TCCGATACCG GCGTCGAAAT CCTCGAAGGT
CTGAAAGTCG GCGAAATCGT CGTGGCCGAT GCCGGCACTT CGCTGCATGA CGGCGACCGG
GTCAGGGCGA TGTTTGCCGA TGAACTCGAT CGGTCGCGGG TACGTTAA
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| Protein sequence | MREVASGLLF GVLAVTIGVV SPSRAADDGG PSGGALVTVA RATNACFSDM VRVTGFVVPR
REAVVSPDHE GSRVTDVLVR EGDIVTLNQE LAKLTPPPGS KSGSVVLRAP AAGLLTQVRT
AVGALASPQA GPMFRIAINN EVELDAEVPS IHILKLNPGA SARISREDGP DLVGSVRLVS
PEIDRKTQMG HVRLSLSADP TLRIGMFARV SIDARRSCGV AVPRSAIDRL TVQVVNGNIV
ETRRVRVGLT SDTGVEILEG LKVGEIVVAD AGTSLHDGDR VRAMFADELD RSRVR
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