| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Nham_3605 |
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| Symbol | |
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| ID | 4031538 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nitrobacter hamburgensis X14 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007964 |
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| Strand | + |
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| Start bp | 3964967 |
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| End bp | 3965869 |
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| Gene Length | 903 bp |
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| Protein Length | 300 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 637972016 |
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| Product | secretion protein HlyD |
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| Protein accession | YP_578793 |
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| Protein GI | 92119064 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0845] Membrane-fusion protein |
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| TIGRFAM ID | [TIGR01730] RND family efflux transporter, MFP subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.550781 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCCGACGG AATTCCCGCG CCCGCGCTCC ATTGCAAGGC AGGCGATCGC TCTCGCCGTT
GTGCTCGGGA CCACCGTCAT TGCTCCCCAG GGGTTCGCGG CCGACGAGCA GGATACCCCG
AACGGCGCCG CCGTTACCGT GCTGAAAGCG ACCCGGTCCT GCTTCTCCGC TACCGTCGAG
GTCACCGGAA TCCTGATCCC TAAAAACGAG ACGGCGGTGC GCCCGGAGCG GCCGGGCTTG
AAGGTCGCCG AGATCATGGT GGAGCCGGGA CAGAGCGTCA CCGCCGGACA GGTGCTTGCC
CGCCTCAACC GTCCCGAAGG CGGATCGACC CAGGTTCACT CCCCGGTGGC CGGACTGGTC
AGCAATTCGT CCGCCGAGGT CGGAGCGATC GCCTCGGGCA AGGGCGAGGC GCTGTTCAAT
ATCATCACCG GCAACGAATT CGATCTGGTC GGTCAGGTGC CGACCACCGA TCTGGCGAAG
CTCGCCGGCG ATCAGCCCGC CAAGGTCAAG GCCGTCGGCG CCGGCGACAT CGACGGCAAG
GTCCGGCTCG TCGCACCGAC GATCGAACCG AACAGCCAGC TTGGGCAGGT CTTCATATCC
GTCGACCCGA GCCGGCATTT GCTCGTCAAT GCGTCCGGCC GGGCGATCAT CAAAACCGGC
GAGAGTTGCG GCATCGCGGT GCCCCTGACG GCGATCCTGT ATGGGAGCGC GGGCACCGTG
GTTCAGGTCG TCCGGCACCA GCGGGTCGAA ACGCGGCATG TCGAGGTGGG GTTGCTGTCG
GGAGGACAGG TCGAGGTCCG CGAGGGATTG TCGGAAGGCG ACGTCGTGGT GGCGCGCGCC
GGCGCCTTGT TGCGCGAAGG CGATCCGGTC AGGCCGGTCG CCGCGGAAGC GAGTGCGAAG
TAA
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| Protein sequence | MPTEFPRPRS IARQAIALAV VLGTTVIAPQ GFAADEQDTP NGAAVTVLKA TRSCFSATVE
VTGILIPKNE TAVRPERPGL KVAEIMVEPG QSVTAGQVLA RLNRPEGGST QVHSPVAGLV
SNSSAEVGAI ASGKGEALFN IITGNEFDLV GQVPTTDLAK LAGDQPAKVK AVGAGDIDGK
VRLVAPTIEP NSQLGQVFIS VDPSRHLLVN ASGRAIIKTG ESCGIAVPLT AILYGSAGTV
VQVVRHQRVE TRHVEVGLLS GGQVEVREGL SEGDVVVARA GALLREGDPV RPVAAEASAK
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