Gene Nham_3561 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNham_3561 
Symbol 
ID4032598 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrobacter hamburgensis X14 
KingdomBacteria 
Replicon accessionNC_007964 
Strand
Start bp3917919 
End bp3918683 
Gene Length765 bp 
Protein Length254 aa 
Translation table11 
GC content67% 
IMG OID637971973 
Productphosphoadenosine phosphosulfate reductase 
Protein accessionYP_578750 
Protein GI92119021 
COG category[E] Amino acid transport and metabolism
[H] Coenzyme transport and metabolism 
COG ID[COG0175] 3'-phosphoadenosine 5'-phosphosulfate sulfotransferase (PAPS reductase)/FAD synthetase and related enzymes 
TIGRFAM ID[TIGR00434] phosophoadenylyl-sulfate reductase (thioredoxin) 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACCTCTC TGCCCGAACA AAAGAGCGTC GCGGCAAGCG CGATGACACA GCCGGCAGCA 
GCGACAGGGA CTCCCGCATT GCCGCCCGCG GCGGCGCTCA ACGACGCGTT GCGCGACGCC
CGGCCTGCGG ACGTGATCGC CGCGGCACTG CGCACGGTCG GGCGCGACCG GCTGGCGCTG
GTGTCGTCGT TCGGCACCGA GTCGGCGGCG CTGTTGAAGG TGATGGCGGA CGTCGATCCG
GCCATTCCCG TGATCTTCCT CGACACCGGA TGGCTGTTTG AGGAGACGCT GGCCTATCGC
GACACCTTGA TCGCCGCGCT CGGCCTGACG GATGTTCGCT CCATTCAGCC ATCTGAGGAT
GTGCTGAAGC GCGAGGATCC CGATCGCGAT TTGTGGTTCT CCGATCCGGA TGCCTGCTGC
CGCATCCGCA AAGTGGAGCC GCTTGTGCGC GCGCTGCAGC CGTTCGACGC CTGGATCAAC
GGTCGCAAAC GGTTTCAGGG CGGCCTGCGC GCCGACATTC CATTCGTGGA AGACGACGGC
GCGCGGCTGA AGTTCAATCC GTTCGCGAAC GCCTCGCGCG CCGACATCGA GGCGATCTAT
GCGTCGGCGA AGCTACCGCC GCACCCGCTT GTCGCGTCGG GGTTTCTCTC CGTCGGCTGC
ATGCCGTGCA CCAGCCGCGC GCAGGCCGGC GAAGACGCGC GCGCCGGCCG CTGGCGCGAC
AGAGCCAAGA CGGAATGCGG CATCCACACG ATGAAGACTT CGTAG
 
Protein sequence
MTSLPEQKSV AASAMTQPAA ATGTPALPPA AALNDALRDA RPADVIAAAL RTVGRDRLAL 
VSSFGTESAA LLKVMADVDP AIPVIFLDTG WLFEETLAYR DTLIAALGLT DVRSIQPSED
VLKREDPDRD LWFSDPDACC RIRKVEPLVR ALQPFDAWIN GRKRFQGGLR ADIPFVEDDG
ARLKFNPFAN ASRADIEAIY ASAKLPPHPL VASGFLSVGC MPCTSRAQAG EDARAGRWRD
RAKTECGIHT MKTS