Gene Nham_3542 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNham_3542 
Symbol 
ID4030525 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrobacter hamburgensis X14 
KingdomBacteria 
Replicon accessionNC_007964 
Strand
Start bp3896935 
End bp3897966 
Gene Length1032 bp 
Protein Length343 aa 
Translation table11 
GC content64% 
IMG OID637971954 
Producthypothetical protein 
Protein accessionYP_578731 
Protein GI92119002 
COG category[N] Cell motility 
COG ID[COG1360] Flagellar motor protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.88705 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATGGCCC TTGCACGCGG GCGCCGGAAC GAGAGCGGAT TCAACTACTG GCCGGGTTTC 
GTCGATGCGC TCTCGACGCT GGTGCTCGCG ATCGTATTCC TGCTGTCGGT GTTTCTGGTG
GTGCAGTTCT TCCTGTCGCA GGAAGTGTCC GGCAAGGACA AGGCGCTGGA ACAGCTCAAT
ACCAAGATCG CTCAGTTGAC CGATCTGCTG TCGCTGGAAA AGCTCGGCAA GCTCAGCCTC
GGCGACGAGG TCAGCCAGTT GCGTGCGGGC CTCGCCTCGG CAGAGGCCGA GCGCGACCGG
GTCAAGGGCC TCTATGATGG CCTCGCCGGC GCCGGCAACA ATGCCGCCGG CCGCAACACC
CAACTGAACA AGGCGCTGGA TTCCGAGAAG CAGGTTTCGT CCCGCGCGCT GGCGCAGGTC
GAGGTGCTGA CCCAGCAGAT CAGCGCGCTG CGCCGGCAAC TGGCGGCGCT GGAGGATGCG
CTCGATGCTT CGGAGAAAAA GGACAAGGAG TCGCAAAACC GCATCGCCGA TCTCGGCCAG
CGGCTGAACG TCGCGCTGGC GAAGCGGGTG CAGGAACTGT CGCGCTACCG ATCGGAATTC
TTCGGGCGCT TGCGCACCAT TCTCGGCAAC CGGCCGGACA TCCGGGTCGT CGGCGACCGC
TTCGTGTTCC AGTCGGAGGT GTTTTTCGAT ACCGCACAGG CGACGCTGCT GCCGGAAGGA
AAGGCCGAGC TCGACAAGGT GGCCGGCGCG CTGATCGATC TCGACAAGCA GATCCCGCAC
GAGATCGCCT GGGTGCTGCG GGTCGACGGC CACACCGACG TCCGGCCGAT CAGCAGCCCG
GTTTTCAAGT CGAACTGGGA ATTGTCGTCG GCGCGCGCGA TCTCGGTGGT GCAATATCTG
GTGTCGCTCG GCGTGCCGCC GCAGCGTCTG GTCGCCGCCG GCTTTGGCGA ATTCCAGCCG
CTCGATCCCG GCACGACGGA AGACGCCTAC AAGCGCAACC GCCGCATCGA ATTGAAGCTG
ACAGAACGGT AA
 
Protein sequence
MMALARGRRN ESGFNYWPGF VDALSTLVLA IVFLLSVFLV VQFFLSQEVS GKDKALEQLN 
TKIAQLTDLL SLEKLGKLSL GDEVSQLRAG LASAEAERDR VKGLYDGLAG AGNNAAGRNT
QLNKALDSEK QVSSRALAQV EVLTQQISAL RRQLAALEDA LDASEKKDKE SQNRIADLGQ
RLNVALAKRV QELSRYRSEF FGRLRTILGN RPDIRVVGDR FVFQSEVFFD TAQATLLPEG
KAELDKVAGA LIDLDKQIPH EIAWVLRVDG HTDVRPISSP VFKSNWELSS ARAISVVQYL
VSLGVPPQRL VAAGFGEFQP LDPGTTEDAY KRNRRIELKL TER