Gene Nham_3533 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNham_3533 
Symbolpgk 
ID4030516 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrobacter hamburgensis X14 
KingdomBacteria 
Replicon accessionNC_007964 
Strand
Start bp3885368 
End bp3886564 
Gene Length1197 bp 
Protein Length398 aa 
Translation table11 
GC content67% 
IMG OID637971945 
Productphosphoglycerate kinase 
Protein accessionYP_578722 
Protein GI92118993 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0126] 3-phosphoglycerate kinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACAAACT CCTTCCGCAC ACTCGACGAC GTCGACGTCA AGGGCAAGCG CGTCCTGCTG 
CGCGTCGATC TCAATGTCCC CATGGAGCAG GGCCGCGTCA CCGACACCAC GCGGCTGGAG
CGCGTGGCGC CGACCATCAC GGAAATCGCC GGCAAAGGCG GCAAGGCGAT CCTGCTGGCG
CATTTCGGGC GGCCCAAGGG CCGCGACGCC AAGGACTCGC TGAGACCGGT CGCGACAGAA
CTTGCGAAGG TGCTCGGCAG GCCGGTCGCG TTCGCCGACG ATTGCATCGG CGACGCTGCC
GAAAAGGCTG TCGCGGCAAT GAAGGATGGC GACATCCTCT GCCTTGAGAA CACCCGCTTT
CATAAAGAGG AAGAGAAAAA CGATCCGGCG TTCGTCGCCG AACTCGCCAA GCTCGGCGAC
ATCTGGGTCA ACGACGCCTT CTCCGCCGCG CATCGCGCGC ACGCCTCGAC CGAAGGGCTC
GGCCACAAGC TGCCGGGCTA TGCCGGACGC ACCATGCAGG CCGAACTCGA GGCGCTCAAC
AAAGCGCTCG AGGCGCCGAC GAAGCCCGTC ATCGCCATCA TCGGCGGCGC GAAAGTCTCG
ACCAAGATCG ACCTTCTGGA AAATCTCGTC AGCAAGGTCG ACGCGCTGGT GATCGGCGGC
GGCATGGCCA ACACCTTCCT GCACGCGCAG GGCGTCAACG TCGGCAAGTC GCTGGCGGAA
AAAGACCTCG CCGCGACCGC GCTGCGTATC CTCGACAAGG CCAAGGCCGC CAATTGCACC
ATCATCCTGC CGGTCGACGC CACCGTGGCG TTCCATTTCG CCGCCAACGC GCCCTCCCAC
GCCTACGGGC TCGATGCGAT CCCAGCCGAG GGCATGATCC TTGACGTCGG GCCGCAGTCG
GTGGAGCGCG TTCGTTCGGC AATCGACGAT GCCGCGACGC TGGTCTGGAA CGGCCCGCTC
GGCGCGTTCG AGCTGTCGCC GTTCGATCGC GGCACCGTCG TCGCCGCCAA ACACGCGGCG
GAGCGCACCA AGACCGGGAA GCTGGTGTCG GTCGCCGGCG GCGGCGATAC GGTCGCGGCG
CTGAACCAGG CCGGGGTGGC TGGCGATTTC AGCTACGTCT CGACCGCCGG CGGCGCCTTC
CTGGAATGGA TGGAGGGCAA GCCGCTGCCC GGCGTCGAGG TGCTGCGGGC TAAATGA
 
Protein sequence
MTNSFRTLDD VDVKGKRVLL RVDLNVPMEQ GRVTDTTRLE RVAPTITEIA GKGGKAILLA 
HFGRPKGRDA KDSLRPVATE LAKVLGRPVA FADDCIGDAA EKAVAAMKDG DILCLENTRF
HKEEEKNDPA FVAELAKLGD IWVNDAFSAA HRAHASTEGL GHKLPGYAGR TMQAELEALN
KALEAPTKPV IAIIGGAKVS TKIDLLENLV SKVDALVIGG GMANTFLHAQ GVNVGKSLAE
KDLAATALRI LDKAKAANCT IILPVDATVA FHFAANAPSH AYGLDAIPAE GMILDVGPQS
VERVRSAIDD AATLVWNGPL GAFELSPFDR GTVVAAKHAA ERTKTGKLVS VAGGGDTVAA
LNQAGVAGDF SYVSTAGGAF LEWMEGKPLP GVEVLRAK