Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Nham_3533 |
Symbol | pgk |
ID | 4030516 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Nitrobacter hamburgensis X14 |
Kingdom | Bacteria |
Replicon accession | NC_007964 |
Strand | + |
Start bp | 3885368 |
End bp | 3886564 |
Gene Length | 1197 bp |
Protein Length | 398 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 637971945 |
Product | phosphoglycerate kinase |
Protein accession | YP_578722 |
Protein GI | 92118993 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG0126] 3-phosphoglycerate kinase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACAAACT CCTTCCGCAC ACTCGACGAC GTCGACGTCA AGGGCAAGCG CGTCCTGCTG CGCGTCGATC TCAATGTCCC CATGGAGCAG GGCCGCGTCA CCGACACCAC GCGGCTGGAG CGCGTGGCGC CGACCATCAC GGAAATCGCC GGCAAAGGCG GCAAGGCGAT CCTGCTGGCG CATTTCGGGC GGCCCAAGGG CCGCGACGCC AAGGACTCGC TGAGACCGGT CGCGACAGAA CTTGCGAAGG TGCTCGGCAG GCCGGTCGCG TTCGCCGACG ATTGCATCGG CGACGCTGCC GAAAAGGCTG TCGCGGCAAT GAAGGATGGC GACATCCTCT GCCTTGAGAA CACCCGCTTT CATAAAGAGG AAGAGAAAAA CGATCCGGCG TTCGTCGCCG AACTCGCCAA GCTCGGCGAC ATCTGGGTCA ACGACGCCTT CTCCGCCGCG CATCGCGCGC ACGCCTCGAC CGAAGGGCTC GGCCACAAGC TGCCGGGCTA TGCCGGACGC ACCATGCAGG CCGAACTCGA GGCGCTCAAC AAAGCGCTCG AGGCGCCGAC GAAGCCCGTC ATCGCCATCA TCGGCGGCGC GAAAGTCTCG ACCAAGATCG ACCTTCTGGA AAATCTCGTC AGCAAGGTCG ACGCGCTGGT GATCGGCGGC GGCATGGCCA ACACCTTCCT GCACGCGCAG GGCGTCAACG TCGGCAAGTC GCTGGCGGAA AAAGACCTCG CCGCGACCGC GCTGCGTATC CTCGACAAGG CCAAGGCCGC CAATTGCACC ATCATCCTGC CGGTCGACGC CACCGTGGCG TTCCATTTCG CCGCCAACGC GCCCTCCCAC GCCTACGGGC TCGATGCGAT CCCAGCCGAG GGCATGATCC TTGACGTCGG GCCGCAGTCG GTGGAGCGCG TTCGTTCGGC AATCGACGAT GCCGCGACGC TGGTCTGGAA CGGCCCGCTC GGCGCGTTCG AGCTGTCGCC GTTCGATCGC GGCACCGTCG TCGCCGCCAA ACACGCGGCG GAGCGCACCA AGACCGGGAA GCTGGTGTCG GTCGCCGGCG GCGGCGATAC GGTCGCGGCG CTGAACCAGG CCGGGGTGGC TGGCGATTTC AGCTACGTCT CGACCGCCGG CGGCGCCTTC CTGGAATGGA TGGAGGGCAA GCCGCTGCCC GGCGTCGAGG TGCTGCGGGC TAAATGA
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Protein sequence | MTNSFRTLDD VDVKGKRVLL RVDLNVPMEQ GRVTDTTRLE RVAPTITEIA GKGGKAILLA HFGRPKGRDA KDSLRPVATE LAKVLGRPVA FADDCIGDAA EKAVAAMKDG DILCLENTRF HKEEEKNDPA FVAELAKLGD IWVNDAFSAA HRAHASTEGL GHKLPGYAGR TMQAELEALN KALEAPTKPV IAIIGGAKVS TKIDLLENLV SKVDALVIGG GMANTFLHAQ GVNVGKSLAE KDLAATALRI LDKAKAANCT IILPVDATVA FHFAANAPSH AYGLDAIPAE GMILDVGPQS VERVRSAIDD AATLVWNGPL GAFELSPFDR GTVVAAKHAA ERTKTGKLVS VAGGGDTVAA LNQAGVAGDF SYVSTAGGAF LEWMEGKPLP GVEVLRAK
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