| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Nham_3531 |
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| Symbol | |
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| ID | 4030801 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nitrobacter hamburgensis X14 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007964 |
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| Strand | + |
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| Start bp | 3882035 |
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| End bp | 3884071 |
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| Gene Length | 2037 bp |
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| Protein Length | 678 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 637971943 |
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| Product | transketolase |
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| Protein accession | YP_578720 |
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| Protein GI | 92118991 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0021] Transketolase |
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| TIGRFAM ID | [TIGR00232] transketolase, bacterial and yeast |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCAAACCG TCAGCCCTCC TCCCCATCTG GACCGGATAT CCAACATGCC GACCGTCGAT
TCCTCCCATA TGGCGAATGC AGTCCGCGCG CTCGCGATGG ACGCTGTAGA AAAAGCAAAA
TCGGGCCATC CCGGCCTGCC GATGGGCATG GCCGACGTCG CCACCGTGCT GTTCACCAAG
TTCCTAAAGT ACGATGCCGC CGATCCGCAT TGGCCGGACC GCGACCGCTT CATCCTCTCC
GCCGGCCACG GCTCGATGCT GCTCTACGCA CTCTTGTACC TGACCGGCCA CAAGGAGATG
ACGCTCGATC AGATCAAGAA TTTCCGCCAG CTCAACTCCA AGACTCCGGG CCATCCCGAG
AACTTCGTCA CCGAAGGCGT CGAGACCACC ACCGGCCCGC TCGGCCAGGG CGTCGCCACC
TCGGTCGGCT TCGCACTGGC GGAGCGCCTG CTGGCCGCCC AGTTCGGCAG CGACGTGGTC
GACCACTACA CCTATGTGCT GTGCTCCGAC GGCGACCTGA TGGAGGGCAT CAGCCACGAG
GCCATCGCGC TGGCCGGCCA TCTCAAGCTC ACCAAGCTGA TTTTCCTTTA CGACGACAAC
GGCATCACCA TCGACGGTCC GATCTCGCTG GCCGACGACG TCGATCAGGT AGCCCGCTTC
AAGGCGTGCG GCTGGGACGC AAGGAGGATC GACGGTCACG ATCCCAAGGC GATCGCGGCC
GCGATCCGTC GGGCGCAAAA ATCCGACAAG CCGTCGCTGA TCGCCTGCAA AACCATTATC
GGCTTCGGCG CCCCCACCAG GGCCGGCACC TCCAAGGCGC ACGGCGAAGC GCTCGGCGCG
GAAGAACTCG CAGGCGCGAA GAAAGCGCTC GGCTGGAACT ACGGCCCGTT TGAAATTCCC
GACGACGTCC TCAAGACCTG GCGCAGCGCC GGACGCAAGG GCAAGCGCCA CAACAAGGAG
TGGCGCGCGC GGTTCGCGGC GAAGTCCGAG GCGGAGCGCG GCGAATTCAC GCGCCGCGCC
ATCGATCGCA AGCCGCCGCA AAACCTCGAC GAGGTGATCC GCAAGCTCAA GGACAAGCTG
GTGGCCGAGC CGCCGACGAT CGCCACCCGC AAGGCCAGCG AACTGGCGCT CGAGGTGCTG
GCGCCGGCGG TGCCGGAATT GCTGCTCGGC TCCGCCGACC TCACACCCTC CAACAACACC
CGCCCCAAGG GTCTGAAGGA AGTGCAGCCC GGTCACGACG ACGGCCGCTA CATCCACTAC
GGCATCCGCG AACTCGGCAT GTCCGCGGCC ATGAACGGCC TTGCGCTGCA TGGCGGATTC
GCGCCGGCCG GCGGCACCTT CATGTGCTTC ACCGACTACG CCCGCCCGGC GATGCGCGTT
TCGGCGCTGG CGCATATCCC TGTGATCTAC ATCATGACCC ACGACTCGAT CGGACTCGGC
GAGGATGGTC CCACCCACCA GCCGGTGGAG CATCTGGCAA GCTTGCGCGC GATGCCGAAC
ATGCGCGTGT TCCGCCCCGC CGATGCGGTC GAGACCGCCG AGTGCTGGCA GCTTGCTCTG
GAGCGGCCGA AGGGACCGAC GGTTCTGGCG TTGTCGCGGC AGAACCTGAC GCCGGTGCGC
AAGACCGCGG ATCCGGACAA CCGCTGCGCG CACGGCGCCT ACGAGCTGGT CGCGGCCAAC
GGCGAGGCGA AAGTGTCGAT CTTCGCGTCG GGATCGGAAA TCGAGATCGC GGTCGCGGCG
CAACAACAGC TCGCCGGACG CGGCATTGCG TCGCGGGTGG TCTCGGTACC CTCGCTCGAA
CTGTTGCTGG AGCAGCCCGA GGAACGGCGG CAGGCCATCA TCGGCAAGGC ACCGGTCAAG
ATTGCCGTGG AAGCGGCAGT GCGCTTCGGC TGGGACGCCG TGATCGGGTC CGACGGCCTC
TTCGTCGGCA TGCACAGTTT CGGTCACAGC GCTCCCGCCA AGGATTTGTA CAAATTCTTC
GGCATCACCG CCGAGGCCGT GGTCGATGCA GCGGAGACGC GCCTTCGTCG AGGTTGA
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| Protein sequence | MQTVSPPPHL DRISNMPTVD SSHMANAVRA LAMDAVEKAK SGHPGLPMGM ADVATVLFTK
FLKYDAADPH WPDRDRFILS AGHGSMLLYA LLYLTGHKEM TLDQIKNFRQ LNSKTPGHPE
NFVTEGVETT TGPLGQGVAT SVGFALAERL LAAQFGSDVV DHYTYVLCSD GDLMEGISHE
AIALAGHLKL TKLIFLYDDN GITIDGPISL ADDVDQVARF KACGWDARRI DGHDPKAIAA
AIRRAQKSDK PSLIACKTII GFGAPTRAGT SKAHGEALGA EELAGAKKAL GWNYGPFEIP
DDVLKTWRSA GRKGKRHNKE WRARFAAKSE AERGEFTRRA IDRKPPQNLD EVIRKLKDKL
VAEPPTIATR KASELALEVL APAVPELLLG SADLTPSNNT RPKGLKEVQP GHDDGRYIHY
GIRELGMSAA MNGLALHGGF APAGGTFMCF TDYARPAMRV SALAHIPVIY IMTHDSIGLG
EDGPTHQPVE HLASLRAMPN MRVFRPADAV ETAECWQLAL ERPKGPTVLA LSRQNLTPVR
KTADPDNRCA HGAYELVAAN GEAKVSIFAS GSEIEIAVAA QQQLAGRGIA SRVVSVPSLE
LLLEQPEERR QAIIGKAPVK IAVEAAVRFG WDAVIGSDGL FVGMHSFGHS APAKDLYKFF
GITAEAVVDA AETRLRRG
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