Gene Nham_3498 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNham_3498 
Symbol 
ID4029429 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrobacter hamburgensis X14 
KingdomBacteria 
Replicon accessionNC_007964 
Strand
Start bp3845212 
End bp3845949 
Gene Length738 bp 
Protein Length245 aa 
Translation table11 
GC content63% 
IMG OID637971910 
Producthypothetical protein 
Protein accessionYP_578687 
Protein GI92118958 
COG category[R] General function prediction only 
COG ID[COG1571] Predicted DNA-binding protein containing a Zn-ribbon domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGATTCTCG TTGGCATCGA CGACACCGAT AATCTTGAAA GCCATGGAAC GGGCTACCTC 
TCGCGGCAGT TGGGTGCGCT GATTGCCGCC TCCGGGATCG CACGGGTCGA TGAGATTACC
CGCCATCAGT TGCTCTTCGA TCGCCGTATT CCCTACACAT CGCACAACAG CTCGCTGTGT
TTGCGGGTTG AACTGCAGTC GGGCGACACC TCCGCCTTGG TGAATATGTG CCGGACCTAT
CTGCTGGAGA ACAGCGCCGT CGGATCCGAT GCCGGATTGT GCATCGCGGC CTGGTCCGAC
GTCCGGCCTG TTGTCGAGGA TTTCGGCTTC AAGGCGAAAA AGGAAATCCT CACCCAGGAC
CAGGCGCGCG ATCTGGCGCG CCGCGAGGGG CTGTTTCTCG AGGGACTGAC CGGCGATCAT
GGCGGCGTGA TCGGCGCGCT TGCCGCGGTC GGCCTGCGCA AGAGCGGTCG CGACGGTCGC
ATCGCCTGGC GGCCGGGTCT GCGCGAAACC CGCGGCATTG TGACGGGTGC CCATCTTCTG
ACCCACTCCG GAATCGATGC CATTCGCCAG GTCCATAGCG GCGAGCCGGT GGACGCATCC
GACCGCATCA GCGTCAACCC CTGGCCGCGC GGCGTCATGA TCGATGGCCG GGCGGTTCTC
CTCGTCGAAC CAACAGGAAA CCCCAATGAG CAGTGTCAAT GGCAGCTCGC CCCAAAGGAT
ATTCTTCGGC AGTACTGA
 
Protein sequence
MILVGIDDTD NLESHGTGYL SRQLGALIAA SGIARVDEIT RHQLLFDRRI PYTSHNSSLC 
LRVELQSGDT SALVNMCRTY LLENSAVGSD AGLCIAAWSD VRPVVEDFGF KAKKEILTQD
QARDLARREG LFLEGLTGDH GGVIGALAAV GLRKSGRDGR IAWRPGLRET RGIVTGAHLL
THSGIDAIRQ VHSGEPVDAS DRISVNPWPR GVMIDGRAVL LVEPTGNPNE QCQWQLAPKD
ILRQY