| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Nham_3491 |
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| Symbol | |
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| ID | 4029344 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nitrobacter hamburgensis X14 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007964 |
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| Strand | + |
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| Start bp | 3839907 |
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| End bp | 3840878 |
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| Gene Length | 972 bp |
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| Protein Length | 323 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 637971902 |
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| Product | PDZ/DHR/GLGF |
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| Protein accession | YP_578680 |
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| Protein GI | 92118951 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0265] Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCTTCAT TGACCGAGTG GAAGGTGCCG GCCGCGGCGC AGCCACACCA TGGCGACTAC
GAATTCGATC TGGACCGCGC GCTGTCCGCG GTGGTTGGGC TGCATTCGAT CATTCCGGCC
GACGCCTTTA CCGCGGACAC CCTCGGCGCC GAGCGCGCAG GCAACGGCGT CGTGATCGAC
GACGGCCTCG TTCTGACCAT CGGGTACCTC ATCACCGAGG CGGAAACGGT GTGGCTGCAT
CTCGCCGACG GCCGCGTGGT GCAGGCGGAC ACGCTCGGCA TCGACCGGGA GAGCGGCTTC
GGTCTGGTGC AGGCGCTCGG CCGGCTCGAC CTCGAGCCGC TGCCGCTGGG TTCGTCGGCC
GCGGCCGGAC TGAACGACCG GGTCGTGGTG GGCGGCGTCG GCGGCCGGAC CCGCTCGCTC
GCCGGCCGTA TCGCCGCCAA GCAGGAGTTC GCCGGCTACT GGGAATACCT GATCGACGAC
GCCATCTTCA CCCACCCGGC CCATCCCAAC TGGGGCGGCG CCGGCGTGAT ATCGGCGGCG
GGCGAACTGA TCGGGATCGG CTCGCTGCAA CTCGAGCGCG AGCACGGCGG CCAGAGCGAG
CATCTCAACA TGAACGTGCC GATCGATCTG CTGAAGCCTG CGCTCGACGA CCTGCGGAAA
TTCGGACGGG TCAACAAGCC GGCCCGGCCC TGGCTCGGCA TCTACGCCAC CGAGATCGAG
GACAGAATCG TCGCGGTCGG AATTGCGCCG AAGGGACCGG CTGCCCGCGC CGAACTCCGC
ACCGGCGACG TGATCCTTGC GGTGAAGGGA GAAAAGGTGT CGGACCAGGC GCAGTTCTAC
CGAAAATTAT GGGCACTGGG TCCCGCAGGC GTCGACGTGC CGCTGACGCT CTATCGCGAG
GGGGACATCT TCGACGTGGT GGTGGCATCG ACCGACCGCG ACCGGATGCT GAAGAAGCCG
CAGCTCCACT GA
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| Protein sequence | MASLTEWKVP AAAQPHHGDY EFDLDRALSA VVGLHSIIPA DAFTADTLGA ERAGNGVVID
DGLVLTIGYL ITEAETVWLH LADGRVVQAD TLGIDRESGF GLVQALGRLD LEPLPLGSSA
AAGLNDRVVV GGVGGRTRSL AGRIAAKQEF AGYWEYLIDD AIFTHPAHPN WGGAGVISAA
GELIGIGSLQ LEREHGGQSE HLNMNVPIDL LKPALDDLRK FGRVNKPARP WLGIYATEIE
DRIVAVGIAP KGPAARAELR TGDVILAVKG EKVSDQAQFY RKLWALGPAG VDVPLTLYRE
GDIFDVVVAS TDRDRMLKKP QLH
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