Gene Nham_3450 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNham_3450 
Symbol 
ID4031101 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrobacter hamburgensis X14 
KingdomBacteria 
Replicon accessionNC_007964 
Strand
Start bp3800616 
End bp3801596 
Gene Length981 bp 
Protein Length326 aa 
Translation table11 
GC content60% 
IMG OID637971861 
Productcytochrome c, class I 
Protein accessionYP_578639 
Protein GI92118910 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.60831 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGCAAAA AGCCCCTAGC GTCACGGCAA ATATTGCCTC TTGTTGCGCT AGTTACGACT 
ACAGCCATAT GGGCAGCGTT GCCGACCGTG GCTAACGCGG CCGATGCAGC GGCAGGTAAA
AAGTTATTCG ACGAGAAGAC GTGCAATGCA TGTCACTCCG TCGGTGGTGG GGATCTCGTA
GGCCCCGACC TGAAGAACGT CACGAAAGAG CGTTCGCACG AGTGGCTGCA TGAGTGGATC
ATGGCGCCAG ACGCAATGAT CGCCAAAAAA GATCCGGTCG CGATCGAGCT GCTCAAGAAG
TATAACGGCA TGGAGATGCC GAACCTTGGG CTTAGTGCCT CTGACGTTGA CTCAATCCTT
GCATATCTGG GTTCGGCTGC GGGCGGCGCT GCGTCGACGG CTGCGCCTGC GCCCGCTCTC
AAGGGTGATG CTGAGAAGGG CAAGGATCTG TTCACGGGCA ATGATCGTTT CGCCAATGGT
GGGCCGCCGT GCATGGCCTG TCACAGCACC GGCGGCCTCG GGGCTTTCGG TGGTGGACAC
CTTGGGCCTG ATTTGACCGA AGTGGCAAAG CGCCTCGGTG GAGTGACCGG TCTTAATGGC
TGGCTTGCAG GCTTGCCCAC GCCGACCATG AAAGCTGTGT GGACGAAGCA GCCGCCGACT
CCGCAGGAAC GCGCCGACGT TGCTGCCTTC CTTTCTCAGG AAGGGCTGGC TGTGCGCTCG
TCCTCGGCGA TATGGCAACT GGCGGGTCTG ACCGGGCTCG GTGCTCTGAT CCTGTTTCTA
ATCGCGGGCT TCAGATGGCG GAACCGATTA AAGTATGGAG TGCGGCGTCC GATGATGGCT
GCGCCCACGA CCGGACGAAG CTCCGGCCCA TATAACGGCG GTTGGTTTAC GGGTATGTAT
CCTGACGGCT GGATAGGCAG GTTTAAGGGA ACTGACGGTA ATAGGCCCCG CGGCCGGACG
AATGCACCGA GGAGACACTA A
 
Protein sequence
MSKKPLASRQ ILPLVALVTT TAIWAALPTV ANAADAAAGK KLFDEKTCNA CHSVGGGDLV 
GPDLKNVTKE RSHEWLHEWI MAPDAMIAKK DPVAIELLKK YNGMEMPNLG LSASDVDSIL
AYLGSAAGGA ASTAAPAPAL KGDAEKGKDL FTGNDRFANG GPPCMACHST GGLGAFGGGH
LGPDLTEVAK RLGGVTGLNG WLAGLPTPTM KAVWTKQPPT PQERADVAAF LSQEGLAVRS
SSAIWQLAGL TGLGALILFL IAGFRWRNRL KYGVRRPMMA APTTGRSSGP YNGGWFTGMY
PDGWIGRFKG TDGNRPRGRT NAPRRH