Gene Nham_3404 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNham_3404 
Symbol 
ID4033227 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrobacter hamburgensis X14 
KingdomBacteria 
Replicon accessionNC_007964 
Strand
Start bp3747017 
End bp3748237 
Gene Length1221 bp 
Protein Length406 aa 
Translation table11 
GC content62% 
IMG OID637971815 
Producthypothetical protein 
Protein accessionYP_578594 
Protein GI92118865 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCCGATC CGATTCTGAT TCTTGGAATT CCCCTCGATT TCATCCTCTT TGGGTTTATC 
CTGTTCGGCA TTGCGCTGTT TCACCGGCAT ACGCTCGCGA TCGCTTTGAT CGGTCTTGCC
GTGATCATCA GTTACAAGAT CGGCTTTACC GGATTCAAAT TCGGCATGGG AGTGGCCGGT
CTTGGCCATC ACATGGAGCA CGAGTGGGTC ACGCTGGCCA ACCTGTTCCT GCTGCTGATG
GGATTTGCTC TGCTGTCGCG ACACTTCGAG GAGAGCCGGA TTCCGGATGA GGTGCCGGCC
CTGTTGCCCG ATGACTGGAA AGGCGGTGCC GTCCTTCTCG TCATCGTTTT CGTGCTGTCG
AGCTTCCTCG ATAATATCGC GGGAGCGCTG ATCGGCGGCA CGGTGGCGCG CCACGTGTTT
CGGGGCAAGG TGCACATCGG TTACCTGGCC GCGATCGTCG CAGCCTCCAA TGCCGGCGGC
GCCGGAAGCG TGGTCGGCGA TACGACGACG ACGATGATGT GGATTGACGG TATCAGCCCG
CTCAGTGTCC TCGAAGCCTA TGTCGCGGCC ATCGTCGCGC TCGTGATTTT CGCGGTTCCG
GCGGCGATGC GGCAGCATCG CTTGTCGCCG GTGGTGAAGA ACGCCACGAG CGGCCTGCGT
GTGGACGGCG CGAGGGTCTT CATCGTCGCG GCCATTCTGA TTGCGGCGCT GGTTGCAAAC
GTGACCGCGA ACCTGAAATT CCCGGCGCTG CTCGATACGC TCCCCGTGCT CGGGCTCGCC
GTCTGGGCGG CGATTTTGCT GACGGCGTTC TTGCGTGCGC CGGATTGGAA GGTCATGCCC
GAGACTTTCA AGGGTACGAT CTTTCTTCTG GCGCTGGTGA CCGCCGCCTC CATGATGCCG
GTGGAAAAAC TGCCGGCGGC GTCGTGGCCC ACGGCGCTCG GCCTCGGCTT CGTTTCGTCG
GTGTTCGACA ACATCCCGCT CACCGCGCTG GCACTCAAGC AGGGTGGCTA TGACTGGGGA
TTTCTCGCTT ACGCCGTCGG CTTCGGTGGC TCGATGGTCT GGTTCGGCTC TTCCGCGGGC
GTGGCGCTGT CGAACATGTA CCCCGAGGCG AAATCGGTGG GATCCTGGGT CAGGAACGGT
TGGCCCATCG CGGTCGCCTA CGTCGTCGGT TTTTTCGTGA TGCTGGCCGT CGTCGGCTGG
CATCCCGACG CGCCCCATTG A
 
Protein sequence
MADPILILGI PLDFILFGFI LFGIALFHRH TLAIALIGLA VIISYKIGFT GFKFGMGVAG 
LGHHMEHEWV TLANLFLLLM GFALLSRHFE ESRIPDEVPA LLPDDWKGGA VLLVIVFVLS
SFLDNIAGAL IGGTVARHVF RGKVHIGYLA AIVAASNAGG AGSVVGDTTT TMMWIDGISP
LSVLEAYVAA IVALVIFAVP AAMRQHRLSP VVKNATSGLR VDGARVFIVA AILIAALVAN
VTANLKFPAL LDTLPVLGLA VWAAILLTAF LRAPDWKVMP ETFKGTIFLL ALVTAASMMP
VEKLPAASWP TALGLGFVSS VFDNIPLTAL ALKQGGYDWG FLAYAVGFGG SMVWFGSSAG
VALSNMYPEA KSVGSWVRNG WPIAVAYVVG FFVMLAVVGW HPDAPH