Gene Nham_3365 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNham_3365 
Symbol 
ID4032745 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrobacter hamburgensis X14 
KingdomBacteria 
Replicon accessionNC_007964 
Strand
Start bp3701379 
End bp3702617 
Gene Length1239 bp 
Protein Length412 aa 
Translation table11 
GC content61% 
IMG OID637971774 
Productphage integrase 
Protein accessionYP_578555 
Protein GI92118826 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCCGCGTG TCAGTAAAGG TCCTCGACTT TGGAAGCGCC CACCCCGGCG GAAAGATGGG 
AAGATCGTCG GCTCCGCGGT CTGGGTCATC AAAGACGGCG GCAAACATAT CGCCACAGGA
TGCCTTGCGA TCCCGGCTGG CACGCGACCT CCAACCGAAG CCGAGCGAGC CCTCGCCAAC
TACATCGCGA ACAAGTACAC GCCGGTGCGG AAAGAGCGGA GCGTCGACAT CATTGATATC
GCCGACGTCC TCTCCATCTA CCGGGACGAC AAACGTAACG CATTTGAGAC CGACGCGCTC
AAGCGGAAAT TCGACAACCG AATCGCCCGT CTAAACGACT TCTTCGGCGA CAAGAAACTG
GGGCAGATGA GCACCCAGCT TTGCAACGAG TACGTGAAGG AGCGCGGTCG CCCCGGCGGG
GCCCGGCGCG ACCTTGAGGA TCTGCGCTCC GCGATCAACC ATCATGCTCG CGAAAATCTG
CACCACGCCG TCATCCACGT TGCGCTGCCT GCCAAGGGCG CGGCACGGGA GCGCTGGTTG
ACCCGAAGCG AGGCGGCCAA GCTGATATGG GCCTGCTGGC GGTACCGCGA GATGCAGCGA
CGCCACCGCG GCAAGGACCT TGGCAAGAAA CTGGCGACCG ACAAGCGGCC ACTGCGGCAT
CTTGCGAGAT TCCTTCTGAT CGGCGTCTAC ACCGGCACCC GGGCCGGCGC GGTCGCAAGC
GCGTCACCGA CGAACGCGGT AGGCAGGTCG CACGTCGATC TTGAACGAGG CATTTTCTAC
AGACTGGCCA AAGGCAAGAA GAAAACGAAC AAGCGCCAGC CGCCAGCTCC CGTTCCGACA
AGACTTCTGG CTCACATGCG CCGCTGGCAT AAACTCAACC CGGATGCCGA GCATTTCGTG
GAGTTCAACG GCAAGGCCGT GAAGTCGGTC AAGACGGCCT TTAAACGGGC CGTGACGCTG
TCGAAAATCT CGCTGGCGGA AGGCCCCGTC TCGCCTCACA CGCTGCGCCA CACCGCCGCT
ACGTGGCTCA TGCAGCGTGG CACGGATCCA TGGCAGGCCG CGGGCTATCT CGGAATGTCG
GTGAAGGTGC TGATCGACAC CTACGGCCAC CACCACCCCG ACTACATGAA GGAAGCGGCC
GCTGCGATCA CATCAAAGGA CCGCACCAAG AGCGTTTCGG TGGTTGAAAC GGTGGTTGAG
CTAAATAAGC ACCATCCAAG AATACGAAAG TCGAAGTAA
 
Protein sequence
MPRVSKGPRL WKRPPRRKDG KIVGSAVWVI KDGGKHIATG CLAIPAGTRP PTEAERALAN 
YIANKYTPVR KERSVDIIDI ADVLSIYRDD KRNAFETDAL KRKFDNRIAR LNDFFGDKKL
GQMSTQLCNE YVKERGRPGG ARRDLEDLRS AINHHARENL HHAVIHVALP AKGAARERWL
TRSEAAKLIW ACWRYREMQR RHRGKDLGKK LATDKRPLRH LARFLLIGVY TGTRAGAVAS
ASPTNAVGRS HVDLERGIFY RLAKGKKKTN KRQPPAPVPT RLLAHMRRWH KLNPDAEHFV
EFNGKAVKSV KTAFKRAVTL SKISLAEGPV SPHTLRHTAA TWLMQRGTDP WQAAGYLGMS
VKVLIDTYGH HHPDYMKEAA AAITSKDRTK SVSVVETVVE LNKHHPRIRK SK