Gene Nham_3352 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNham_3352 
Symbol 
ID4032731 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrobacter hamburgensis X14 
KingdomBacteria 
Replicon accessionNC_007964 
Strand
Start bp3692363 
End bp3693085 
Gene Length723 bp 
Protein Length240 aa 
Translation table11 
GC content59% 
IMG OID637971761 
Productputative phage repressor 
Protein accessionYP_578543 
Protein GI92118814 
COG category[K] Transcription 
COG ID[COG2932] Predicted transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.140887 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGATGACC TCAAAACGAT CGTCGCCCGC ATTGAAGCTA GGCTGGAAGA AATGGGGACC 
AACCCCGCCG CAGCATCACG GGCGGCTGGC TTAAGTCCGG GCGCGATCCG CAATCTCCAG
CGGGGCGCAA AGGGCGAAAT CAAACTGAAG GGGGCTTCCG GTAAGACGCT GTCGGCCTTG
GCGGAATACC TACAGGTCCC GCTTGATTGG CTTATGAGTG GGTCTGGCGA GCCAGGGAAA
CCTCAGGTTA TTCGGCCTGC CGGCCCCGAA CGGTCAACCG TCGTTGACGC CCCGAACGCC
CCTCGCCTTT CCGAGTTCGG CGATTTTGAC GTCGAAGTCC GCGGCATAAG CGTCGGCGGG
GGCGATGATG AGTTTTACTT CAATGGCGAC GTGATCGACC ATCTTCGGCG GCCACCGGGG
ATTCTGCGGG CGAAAAATGT TTTTGCCCTC AATGTCGCGG GCGATAGCAT GATGCCGAGA
TACGAGCCGG GAGAGCCGAT CTATGTGCAG CGGGCGAACC CTGTCATCGG CGACTATGTT
GTGGTGGAAC TGTACCCGGA AATAGAAGGT CAGGCCGGCA AGAGCTTTTT GAAGAAACTA
GTTCGTCGCA CCGGGCGGCG CGTGACGTGC AGCCAGCTAA ACCCGCCGAA AGAGTTGGAA
TTCGATACCG GGGAAGTGAA GGAAATCTAC CGGGTGCTGA AGCCGCGGGA TTTGCTGGGG
TGA
 
Protein sequence
MDDLKTIVAR IEARLEEMGT NPAAASRAAG LSPGAIRNLQ RGAKGEIKLK GASGKTLSAL 
AEYLQVPLDW LMSGSGEPGK PQVIRPAGPE RSTVVDAPNA PRLSEFGDFD VEVRGISVGG
GDDEFYFNGD VIDHLRRPPG ILRAKNVFAL NVAGDSMMPR YEPGEPIYVQ RANPVIGDYV
VVELYPEIEG QAGKSFLKKL VRRTGRRVTC SQLNPPKELE FDTGEVKEIY RVLKPRDLLG