Gene Nham_3331 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNham_3331 
Symbol 
ID4032244 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrobacter hamburgensis X14 
KingdomBacteria 
Replicon accessionNC_007964 
Strand
Start bp3676356 
End bp3677267 
Gene Length912 bp 
Protein Length303 aa 
Translation table11 
GC content63% 
IMG OID637971741 
Productbaseplate J-like protein 
Protein accessionYP_578523 
Protein GI92118794 
COG category[R] General function prediction only 
COG ID[COG3948] Phage-related baseplate assembly protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCGCGGCC TGCCGTCAAT CAATCTGGCT GATCTACCGC TGCCGCCGGT ATTGCAGCCG 
CTCGATTATG AAGCGCTGCT GGCCGACATT ATCGCCGAGT TCAAGACGCG GTGGGAAGCG
GTGCGGGCGC TGCATCCGGA ACTGCCGTCC TACGATCAGC AGATGCTGGA AACGGACCCG
GCCAAGATCG TGCTGGAAAG CGCGGCCTAT ATCTACATGC TGACGCTGGC GCGCGTGAAT
GACGCTGCAA AGGCGCTGAT GTTGGCGACG ACGTCCGGCG GCGATCTCGA CAGCTTCGCC
GCCGACTTCG ACCTGCCGCG CCTGGTCGTG ACACCAGCGA CGGACGATGC GCCGGCTGTG
ATGGAGTCAG ACGCCGACTA TCGCCGACGA CGATGGTTGG CAACCGAGGG TTATGCGGCC
GCCGGCCCAG AGGATGCCTA TCGGTTCTTT GCAATGTCAG CCGATCCTTC GATCAAGGAG
GCATTGGCCA TCAAGGGCGA CGACAATCGC GTGGATCTGG TGCTGCTGTC CCGGGACGGC
AATGGCGCGG TTTCGGGCCA GATTGTCAGC AAGGTGCATG CGGCGCTGTC GCCGTTGAAA
ACCCGACCGC TGACCGATTC GCTTTATACG CGATCAGCCT CGATCATTGC GCAACCGATC
AGCGTGCTGA TCACGGTGCC ATATGGGCCG GATCGCGAGA CGGTCCGCGC CAAGGCGCTT
TCGAATATCG CCGCCTATGC CGGCAGCCGC AACGCGCTCG GCATGGTGTT GCGCGTCGAC
GGCATCATCG GTGCGGCCCG CGAGGGTAAC GCGGTCGAGA CCATGCAGGT CGTTTCGCCG
GCGGCTGATG TCGATCCGGG TCCGTTCGGC GCGGTTTACG TCGACGGCAT CACCGTGGCT
GTCGCGACAT GA
 
Protein sequence
MRGLPSINLA DLPLPPVLQP LDYEALLADI IAEFKTRWEA VRALHPELPS YDQQMLETDP 
AKIVLESAAY IYMLTLARVN DAAKALMLAT TSGGDLDSFA ADFDLPRLVV TPATDDAPAV
MESDADYRRR RWLATEGYAA AGPEDAYRFF AMSADPSIKE ALAIKGDDNR VDLVLLSRDG
NGAVSGQIVS KVHAALSPLK TRPLTDSLYT RSASIIAQPI SVLITVPYGP DRETVRAKAL
SNIAAYAGSR NALGMVLRVD GIIGAAREGN AVETMQVVSP AADVDPGPFG AVYVDGITVA
VAT