Gene Nham_3283 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNham_3283 
Symbol 
ID4029477 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrobacter hamburgensis X14 
KingdomBacteria 
Replicon accessionNC_007964 
Strand- 
Start bp3618066 
End bp3618743 
Gene Length678 bp 
Protein Length225 aa 
Translation table11 
GC content60% 
IMG OID637971695 
Productcytochrome c, class I 
Protein accessionYP_578477 
Protein GI92118748 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.86015 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAGGGC TTTTACTCGC CGTCGCGGGC TTGACCGCGG CATTCCTGAG CAGCGCCAGC 
GCTGCGGACA AGCTGGACCC GAGCTGCGGC GGTTGTCACG CACTGGTCAA GCCGACCGAC 
ACGTCGCTGG ATCGGCTGCT GACCCGTAAG GGGCCCGACC TTTGGTACGC CGGCAGCAAG 
TTCAACAAGG ACTGGCTGGT CTCCTGGTTG CAGGATCCCA AACCCATTCG TCCTGCCGGC 
TATCCGTATT TCAAGAACAT CAAGAAGGGC GACAAACATG ATGAGATCGA TCAGTCCAAG 
ATCGCCGCTC ATCCGAAGCT GAAAAAGGCG GATGCCGAAG CGGCCGCTGC GGCGTTGATG 
GATTTGAAAG CCCCCCCCGA CCTCGTTCCG GCAGGCGCCT TCAAGGGCGA TATGAAGGGT 
GCGCGCATGG GTGCGCTCGC GTTCGTCAAG TTTCGTGGCT GTGCCGCGTG CCATCAGGGC 
GAGAAAGGCG AAGGTGGCCT TTCCGGACCG CGATTGACCG ATGCAGGAGT GCGGCTGCAG 
CCAGATTTCA TCGCCGCTTA CACGGCCGAT CCGCAGCGTT TCGATCCGCA TATCTGGATG 
CCGACGTCGA ACTTGAAGGA TAAGGATATC CAGCGGCTGA CCGCGTTTCT GGTGGAACTG 
AGCCAGGGAG ACAAGTGA
 
Protein sequence
MKGLLLAVAG LTAAFLSSAS AADKLDPSCG GCHALVKPTD TSLDRLLTRK GPDLWYAGSK 
FNKDWLVSWL QDPKPIRPAG YPYFKNIKKG DKHDEIDQSK IAAHPKLKKA DAEAAAAALM 
DLKAPPDLVP AGAFKGDMKG ARMGALAFVK FRGCAACHQG EKGEGGLSGP RLTDAGVRLQ 
PDFIAAYTAD PQRFDPHIWM PTSNLKDKDI QRLTAFLVEL SQGDK