Gene Nham_3234 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNham_3234 
Symbol 
ID4031896 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrobacter hamburgensis X14 
KingdomBacteria 
Replicon accessionNC_007964 
Strand
Start bp3565268 
End bp3566431 
Gene Length1164 bp 
Protein Length387 aa 
Translation table11 
GC content66% 
IMG OID637971647 
Productpeptidase M48, Ste24p 
Protein accessionYP_578429 
Protein GI92118700 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0501] Zn-dependent protease with chaperone function 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCAGTCT ACGGTCTCTA CACCCACATC GCATCGAACA AGATCCGTTC GATGTTTTTG 
CTCGCCGGGC TGTTCGTCCT CATTTACGTG ATGGTGTTCG CGGGCGCGCT GATCGGCGAA
GTCCTGCAGT TCGACGCCAG CCGCACCGCG ACGTTCTATC TCACCCGGGC CTGGCATGAC
CTGATCGTCG CCTTCCCCTT CGCCACGGCG GGTTCGGCGC TGTGGATCGT GATCGCCTAT
TTCTTCCATC AGTGGCTGAT CGATGCGGTC ACCGGCGGCC ATGATGTCAG CCGCAAGGAC
CAGCCGCGGC TCTACAACCT GCTGGAAAAC CTCTGCATCT CGCGCGGCAT CCCGATGCCG
AAGCTGAAGG TGGTGAACAC CGACGCGGTC AATGCCTTCG CCACCGGCCT GAACCGCCGC
CAATACGCCA TCACCGTCAC CACCGGTCTG ATGAAGGCGC TCAACGACCG GGAAATGGAA
GCGGTGCTCG GCCACGAGCT GACCCACATC CGCAACGGCG ACGTGCAGTT GATGGTGGTC
GCCGTCGTCA TCGCCGGGGT GATCGGCTTC GTCGCCGAGT TGTTCTTCCG CATCTTCTTC
AACAGCGGCA CGCGGATCAG CGGCGGAGGT TGGCGCTCGT CCCGCTCGTC CTCGTCCAGC
GGCAGCAGCG ACAGCAAGGG CGGCGGAGGC GGCGCCATCA TCGCCGTGAT TCTCGCCGTG
GCCCTGATCG CGCTGGCCTG GTTTTTGTCG CAGGTGGTGC GGCTGGCGCT GTCGCGCTCG
CGCGAACTAA TGGCCGATGC CGGCTCGGTC GAATTGACCA AGGATCCAGA TGCCATGATC
TCGGCGCTGC GCAAGATCGA GAACCGCGGC GAGCTACCGG GCGCGACCTC GGCCGTGATG
GAAATGTGCG TCGACAACCC GCGCGAAGGC TTCGCCGACC TGTTCGCCAC CCATCCGTCG
ATCGAGACGC GGGTGCGCGC GCTGGTGACA TATGCCGGCG GCCACGATCC CGGCCCGATG
CAGCCGCACA ACCAGCCCGA GCGCGCCGCG ACCGATCCCA AACTGCCCGG CGGACAGGAA
CTCGCGCCGG GGCCGTGGAG CGAGCCCACG CCGCCGGCCA GCGCGCCGCC GCCCGCTCCC
GGCCCGTGGG GCAATCGCTC CTGA
 
Protein sequence
MAVYGLYTHI ASNKIRSMFL LAGLFVLIYV MVFAGALIGE VLQFDASRTA TFYLTRAWHD 
LIVAFPFATA GSALWIVIAY FFHQWLIDAV TGGHDVSRKD QPRLYNLLEN LCISRGIPMP
KLKVVNTDAV NAFATGLNRR QYAITVTTGL MKALNDREME AVLGHELTHI RNGDVQLMVV
AVVIAGVIGF VAELFFRIFF NSGTRISGGG WRSSRSSSSS GSSDSKGGGG GAIIAVILAV
ALIALAWFLS QVVRLALSRS RELMADAGSV ELTKDPDAMI SALRKIENRG ELPGATSAVM
EMCVDNPREG FADLFATHPS IETRVRALVT YAGGHDPGPM QPHNQPERAA TDPKLPGGQE
LAPGPWSEPT PPASAPPPAP GPWGNRS