| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Nham_3126 |
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| Symbol | |
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| ID | 4032312 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nitrobacter hamburgensis X14 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007964 |
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| Strand | + |
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| Start bp | 3446159 |
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| End bp | 3449110 |
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| Gene Length | 2952 bp |
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| Protein Length | 983 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 637971540 |
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| Product | twin-arginine translocation pathway signal |
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| Protein accession | YP_578322 |
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| Protein GI | 92118593 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0243] Anaerobic dehydrogenases, typically selenocysteine-containing |
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| TIGRFAM ID | [TIGR01409] Tat (twin-arginine translocation) pathway signal sequence |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.389263 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGCTGATCA AGAGATCACA GCGACAGAAT GCGCAAATCG CGCGCGGCGG TTCGGCTCTC
GGAACGCTGA CCGAGCCGGG AAAAGGCTTC GACCGCCGCA CGTTCCTGCG CCGTTCCGGT
CTGGCCGCCG GCGGTCTTGC CGCGTTGAGC ACGCTGCCGC TCGGCACCGT CCGCAAGGCC
GAAGCGGCGG CTGCGGGGCC GCTGACGTCG GGCGCGACGG TTCGTAAAAG CGTGTGCACG
CATTGCGCCG TCGGCTGCAC CGTCACCGCC GAGGTGCTGA ACGGTGTCTG GATCGGCCAG
GAGCCGAGCT GGGATTCGCC GATCAATCGC GGCTCGCACT GCGCCAAGGG CGCATCGGTG
CGCGAACTCG TCCATAACGA GCGCCGCCTC CGCTACCCGA TGAAACTTGT CAACGGACAA
TGGACGCGCG TTTCGTGGGA TACGGCCATC GACGAGATCG GCGACAAGTT AGTGCAGGTC
CGCCAGAAGT CGGGCGGCGA CTCGGTCTAT TGGCTCGGTT CGGCGAAGAT GACGAACGAA
GGGTCGTATC TGTTCCGCAA GCTCGGTGCG TTCTGGGGCA CCAACAACAC CGATCACCAG
GCGCGCATCT GCCATTCGAC AACTGTGACC GGCGTGGCCA ACACCTGGGG CTACGGCGCG
ATGACCAACA GCTTCAACGA TATTCGTAAC TCCAAAACGC AGATCATCAT GGGCGGCAAT
CCCGCCGAAG CGCATCCGGT TTCGCTACAA CATCTTCTTG AAGGCGCCGA ATTGAACAAG
GCGAATGTCG TCGTGATCGA TCCGCGCATG ACGCGGACCG CCGCACATGC GACCGAGTAC
GTGCGGCTGC GGCCGGGAAC AGACATTCCG GTTCTGTACG GAATGATGTG GCACATCCTC
AAGAATGGCT GGGAAGACAA GGAATTCATC CGGCAACGCG TTTACGGTTT CGACGATCTT
CGCAAGGAAG CGGAGAAGTG GAATCCGGAG GAAGTCGAAC GCGTCAGTGG CGTTCCGGGC
GCGCAGCTTG AGCGCGTCGC CAAGATGTTC GCGACGGAAA AGCCGGCGAC GTTGATTTGG
TGCATGGGGC AGACCCAGCA TACGGTCGGC ACCGCGAATG TGCGCGCGAG TTGCATCGCC
TTGCTGCTGA CCGGCAATGT CGGCAAACCC GGCACCGGCG CTAACATCTT CCGCGGCCAT
GACAACGTGC AGGGCGCGAC CGACGTCGGG CTCGATATCG TGACGCTGCC TTTCTACTAC
GGCCTGGCCG AAGGCGCCTG GAAGCACTGG TCGCGTGTCT GGGAGGTCGA ATACGACTAT
CTGGTGTCAC GTTTCGACGA CAAGAAATCG ATGGAAACGC CCGGCATTCC GCTGACGCGG
TGGTTCGACG CCGTTATCCT TCCAAAAGCC GACGTGGCCC AGAAAGACAA TGTGAAGGCG
GTGTTCGTGC AGGGACACGC CAGCAACAGC ATTACGCGAA TCCCCGAATC GATGAAGGGA
CTAAAGGCGC TGGAATTGCT CGTCATCGCC GACCCGCATC CGACCACATG GGCTTCGCTC
GCGGTACAAG CCGGCCGCAA GGACGGTGTT TATCTTCTGC CTGTCGCCAC GCAGTTCGAA
TGCAAGGGCT CGCGCGTCGC CTCGAATCGC TCGCTGCAAT GGGGTGAGCA GATCGTGAAG
CCGGTCTTCG AGTCGAAGGA CGACCTCGAG GTCATGTATC TTGTCGCCAA AAAGCTCGGC
TTTGCAGACA AGCTGTTCAA GAACATCAAG GTCGAGGACA ACCTGCCGGT GGCGGAGGAT
ATCCTTCGCG AGATGAATCG CGGGAGCTGG TCGACCGGCT ATTGCGGCCA ATCGCCGGAA
CGCCTCAAGG CGCACATGAA AAACCAGAAC AAGTTCGATC TGGTCACCAT GCGCGCGCCA
AAGGACGATC CGGAAGTCGG TGGGGACTAT TACGGCTTGC CGTGGCCGTG CTGGGGTTCG
CCGGAGGTGC GGCATCCGGG CACGCCCCTG CTCTACAACA CCAATCTTGC GGTCATGGAC
GGCGGCGGTT GCTTCCGCCC GCGTTTCGGA CTCGAGCGCG AGGAGAAGCT GCCCGATGGC
AGCACCCGCA AGGTCAGCCT GCTCGCGGAC GGTTCCTATT CGAAGGATTC GGAAATCAAG
GACGGCTATC CCGAATTCAC GCTGGCGAGC TTGAAGAAGC TTGGCTGGGA CAAGGATCTG
ACCGAGAGCG AGATGGCCAC GATCAACAAG GTCAATCCCG ACAAACCGGA TACGGTGTCC
TGGGCGCTCG ATCTCTCGGG CGGTATTCAG CGCGTCGCGC TGATGCACGG CTGCGTTCCC
TACGGCAACG GCAAGGCGCG CATGAACGCC TTCGGTCTGC CGGATCCGAT CCCGGTGCAT
CGCGAACCCA TTTACTCTCC GCGTGTCGAT CTGGTGTCGA AATATCCGAC GTTGCCGGAC
GCCAAGCAGT TCCGCTTACC CAACATCGGC TTCTCCGTGC AGAAGGCCGC GGTCGAGAAA
GGAATCGCCA AGCAGTTTCC GCTCGTCCTC TCCTCAGGCC GCCTGGTCGA ATATGAGGGC
GGCGGCGAGG AGTCGCGGAG CAATCCGTGG CTCGCCGAAT TGCAGCAGGA CATGTTCATC
GAGATCAGCG TCGCGGACGC CGCCGAACGC GGCATCAAGG ACGGCGGCTG GGTCTGGGTG
ACGGGCGCCG AGAACAGCTC GAAAGCGAGG ATGAAGGCGC TGGTGACCGA GCGGGTCGGC
AAGGGCGTGG CGTGGATGCC GTTCCACTTC GGCGGATGGT TCGGAGGCGT CGATTTGCGC
AACAACTACC CGAAGGGGAC CGATCCGATC GTGCTGGGCG AGAGTGCCAA TACGATCACG
ACCTACGGCT ACGATCCTGC AACGGGCATG CAGGAACCGA AGGTCACGCT CTGTCAGATC
GTCGCGGCAT AA
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| Protein sequence | MLIKRSQRQN AQIARGGSAL GTLTEPGKGF DRRTFLRRSG LAAGGLAALS TLPLGTVRKA
EAAAAGPLTS GATVRKSVCT HCAVGCTVTA EVLNGVWIGQ EPSWDSPINR GSHCAKGASV
RELVHNERRL RYPMKLVNGQ WTRVSWDTAI DEIGDKLVQV RQKSGGDSVY WLGSAKMTNE
GSYLFRKLGA FWGTNNTDHQ ARICHSTTVT GVANTWGYGA MTNSFNDIRN SKTQIIMGGN
PAEAHPVSLQ HLLEGAELNK ANVVVIDPRM TRTAAHATEY VRLRPGTDIP VLYGMMWHIL
KNGWEDKEFI RQRVYGFDDL RKEAEKWNPE EVERVSGVPG AQLERVAKMF ATEKPATLIW
CMGQTQHTVG TANVRASCIA LLLTGNVGKP GTGANIFRGH DNVQGATDVG LDIVTLPFYY
GLAEGAWKHW SRVWEVEYDY LVSRFDDKKS METPGIPLTR WFDAVILPKA DVAQKDNVKA
VFVQGHASNS ITRIPESMKG LKALELLVIA DPHPTTWASL AVQAGRKDGV YLLPVATQFE
CKGSRVASNR SLQWGEQIVK PVFESKDDLE VMYLVAKKLG FADKLFKNIK VEDNLPVAED
ILREMNRGSW STGYCGQSPE RLKAHMKNQN KFDLVTMRAP KDDPEVGGDY YGLPWPCWGS
PEVRHPGTPL LYNTNLAVMD GGGCFRPRFG LEREEKLPDG STRKVSLLAD GSYSKDSEIK
DGYPEFTLAS LKKLGWDKDL TESEMATINK VNPDKPDTVS WALDLSGGIQ RVALMHGCVP
YGNGKARMNA FGLPDPIPVH REPIYSPRVD LVSKYPTLPD AKQFRLPNIG FSVQKAAVEK
GIAKQFPLVL SSGRLVEYEG GGEESRSNPW LAELQQDMFI EISVADAAER GIKDGGWVWV
TGAENSSKAR MKALVTERVG KGVAWMPFHF GGWFGGVDLR NNYPKGTDPI VLGESANTIT
TYGYDPATGM QEPKVTLCQI VAA
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