Gene Nham_3090 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNham_3090 
Symbol 
ID4030414 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrobacter hamburgensis X14 
KingdomBacteria 
Replicon accessionNC_007964 
Strand+ 
Start bp3414697 
End bp3415302 
Gene Length606 bp 
Protein Length201 aa 
Translation table11 
GC content60% 
IMG OID637971505 
Productnuclease (SNase-like) 
Protein accessionYP_578287 
Protein GI92118558 
COG category[L] Replication, recombination and repair 
COG ID[COG1525] Micrococcal nuclease (thermonuclease) homologs 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.906098 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGTTAACCG TTGGGCCAGC CAACGCGGCT AAGCTCGATG CCATGTCTAA GCCATTCATC 
TTCGCCAGAG AGCGCCACTT CCTCGGGATC ACCGAACGAC GGTGGCAATG GATAGGTAGA 
CGCACGCTAA TCGCGGCCGG TCTTATCGCC TGGGGATTTG CAGCGTATCA GTTCGGAGCA 
CAGCGCGGCA TGGCTCTAGT GTCGAGTACA TGGGACAGCT TGCGCTTGAA CATTCTCGGC 
ACGAGCGCAC CTATCAAGGT CGATGCCATT CGATCGATGC CGGCGTGCTT TGGCCCGGTA 
CGGTTCAACT GCGTCGTTGA TGGCGACACG GCCTGGGTAG ACAGCGAGAA AATCAGGATA 
AGCGGGATCG ATGCGCCCGA GATTGACGGG AAGTGCCCCT ATGAGCGCGT CCTGGCACAA 
CGTGCGAAAT CCCGCCTGAG CGAATTGCTA TCCGCGGAGC CGTTCTCGGT GTCACGCTCC 
GGCACTGATC GGTATGGGCG CACGTTGGCG ACAGTCTATC TCCGAGACAG AGGCGATGTT 
GGTTTGGTGC TGGTGCGGGA TGGGCTGGCG CGGGTTTGGA GCGGCCGACG CATGCCGTGG 
TGTTGA
 
Protein sequence
MLTVGPANAA KLDAMSKPFI FARERHFLGI TERRWQWIGR RTLIAAGLIA WGFAAYQFGA 
QRGMALVSST WDSLRLNILG TSAPIKVDAI RSMPACFGPV RFNCVVDGDT AWVDSEKIRI 
SGIDAPEIDG KCPYERVLAQ RAKSRLSELL SAEPFSVSRS GTDRYGRTLA TVYLRDRGDV 
GLVLVRDGLA RVWSGRRMPW C