| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Nham_3057 |
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| Symbol | |
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| ID | 4030958 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nitrobacter hamburgensis X14 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007964 |
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| Strand | + |
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| Start bp | 3375341 |
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| End bp | 3376663 |
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| Gene Length | 1323 bp |
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| Protein Length | 440 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 637971481 |
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| Product | polysaccharide export protein |
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| Protein accession | YP_578263 |
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| Protein GI | 92118534 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG1596] Periplasmic protein involved in polysaccharide export |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.521526 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAGCTCT GGCCTGAATC AGTCTGGAAT GCGAAGTTGC TGCCAGTTAC CGCTAGCGCA
GGGGATTTGG CTCTGTCCGG CACGAAGCCT CGGTGGGCTA AAGTCAGAAA TATCAGCTTG
GCTCTCGCCG CACTTTCTTG CGGCGGTTGC ACAGTTGTGC CCACCACCGG CCCGCAGAGC
ACGGACATCC GCATGGGCCA GGCAGGCGAA CAACCGGAAA GCCTTCCCTA TGCCCTCGTG
AAGTTAAACC CAGATGTTGT TCGGATTCTG GCTCAATTTA CGCCAAAGCT GTCCAGCGCA
TTCGCAAACC GATCCCCTCC CACGGCATTT CGCTTCGGGA TTGGCGATAC CATCAGTGTG
ACAATTTTTG AGGCCGCCGC GGGCGGCCTG TTCATCCCCG TCGAAGCCGG TGTGCGTCCG
GGTAATTTTG TTACAATCCC TAACCAGGCG GTCGATAACA ACGGCAATAT TTCTGTGCCC
TACGCGGGGG CTGTTCGCGC AAAAGGCAAG ACACCCGTTG AGGTTCAACA GGCGATCGTC
TCAGCCCTTA GCAACCGCGC CATCGAGCCT CAGGCGGTGG TGTCGCTTGT CGATCAGCGA
ACGTCACTGA TCAGCGTGCT GGGCGATGTT CATTCCGCCG GCCGCTTCCC TGCAAGCGCC
TCCGGCGAAC GCGTTCTGGA TGTGATCGCG CGGGCGGGCG GCCCCAGCAC GCAAGGTTAC
GACACATGGG TAACACTTGA ACGCGCAGGA CACCGCGCGA GCGTCCCATT TGGCGCGCTG
GTCTATGAGC CGTCGAACAA TATCTATGTT CTTCCGAACG ATACGATCTA TCTTTACAAT
CAGCCGCAGA CCTTCGTCGC GTTCGGCGCC GCCGGGACGC AGGGACAATA CAAGTTCGAT
GCGTGGCGGA TTTCACTCGC AGAAGCCGTC GGAAAACATG GAGGCCTCAA CGATTCGCTT
GCCGATCCTG GGTCCGTATT TCTTTATCGC GGTGAAACCC GGGAGGTCGC CGAGCGACTT
GGGGTCGATT GCTCAAGATT TCAAGGACCA ATTATTCCGA TCATTTACAA CGTGAACTTG
CGGGATCCTT CCGGATACTT CCTGGCTCAG GCATTCGACA TTCGGAACAA GGACGTGATC
TACACGTCGA ACTCTCCCTT GGTGGAAACG ACGAAGTTCC TGAGTTTTCT GAGAACTATT
ATGGCTACCG CCAACGACCC GATCGTCTAC GCAACGAATG CCTACGCGTT GAAGGCGGCA
ATCAACGGGG TTGCTCCAAC AACGATTGTT AATCCCCCGA CCCCCATCGC CGTCACCCGC
TAA
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| Protein sequence | MKLWPESVWN AKLLPVTASA GDLALSGTKP RWAKVRNISL ALAALSCGGC TVVPTTGPQS
TDIRMGQAGE QPESLPYALV KLNPDVVRIL AQFTPKLSSA FANRSPPTAF RFGIGDTISV
TIFEAAAGGL FIPVEAGVRP GNFVTIPNQA VDNNGNISVP YAGAVRAKGK TPVEVQQAIV
SALSNRAIEP QAVVSLVDQR TSLISVLGDV HSAGRFPASA SGERVLDVIA RAGGPSTQGY
DTWVTLERAG HRASVPFGAL VYEPSNNIYV LPNDTIYLYN QPQTFVAFGA AGTQGQYKFD
AWRISLAEAV GKHGGLNDSL ADPGSVFLYR GETREVAERL GVDCSRFQGP IIPIIYNVNL
RDPSGYFLAQ AFDIRNKDVI YTSNSPLVET TKFLSFLRTI MATANDPIVY ATNAYALKAA
INGVAPTTIV NPPTPIAVTR
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