| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Nham_3000 |
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| Symbol | |
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| ID | 4032573 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nitrobacter hamburgensis X14 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007964 |
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| Strand | + |
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| Start bp | 3305134 |
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| End bp | 3305925 |
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| Gene Length | 792 bp |
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| Protein Length | 263 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 637971433 |
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| Product | two component LuxR family transcriptional regulator |
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| Protein accession | YP_578215 |
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| Protein GI | 92118486 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG2197] Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.42213 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGGAGGC ATCAAACCTT TGAAACCATT CTCATAGGAA AGGGTATTTT AATTAGAGAG
GGCATTGCCC GAATTTTGCG TGCGGAGAAC TTTCGTGTCC GGGCATCGGT ATCATCTCCT
GATGAATTGA CAGGTGGATT TCGAGGGCCG CAACTGTTGT TTCTGATTGT CCATACCAGC
GATGACTTTG ATCTCGCCGT TGAACAGATC AACCTTGTGA GAAATCAATA TCCGAGCGGG
CGCATTGTAG TTGTGGCGGA TCACTATAAG TCAACCGAGC CGGATTTAGT ATTTCAGGTC
GGCGCCGCCG GTTATCTTGT AAGCACGATG TCCTGCGATG CGTTCGTCAA ATCCATCGAG
TTGGTGATGA TGGGTGAGAC GGTTTTCCCG CCGGCATTCC TGGCATCATC TCCCGATACC
AAGAGCGAGC CTCGACGAAA AGCCGCGGTC TCCGGCGAAG ACGCGATCCT CGTCGCCCGA
GAGGATGCGA CCGCGCCGCA GCTTTCTCCA AGAGAGCTGG CAATTCTGCG GTGTCTGATC
AGTGGCAATT CCAACAAGTG CATTGCGCGA AAGATCGATA TCGCAGAGGC AACCGTAAAG
GTCCACGTCA AGGCGATTCT GCGCAAGATT CGGGCCCAGA ATCGAACGCA GGCTGCGATT
TGGGGGATGA ACCATCCGCT ACTGGCACAA CCGATAAACG GTATTCCCCA TCTCCCAATC
GCCGATGCAA ACGAGCCGCT TTCAAGCTCC GTCGCGGTGA TCTCGGCGAT AAAGCGAATT
GGGTCGTCAT GA
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| Protein sequence | MRRHQTFETI LIGKGILIRE GIARILRAEN FRVRASVSSP DELTGGFRGP QLLFLIVHTS
DDFDLAVEQI NLVRNQYPSG RIVVVADHYK STEPDLVFQV GAAGYLVSTM SCDAFVKSIE
LVMMGETVFP PAFLASSPDT KSEPRRKAAV SGEDAILVAR EDATAPQLSP RELAILRCLI
SGNSNKCIAR KIDIAEATVK VHVKAILRKI RAQNRTQAAI WGMNHPLLAQ PINGIPHLPI
ADANEPLSSS VAVISAIKRI GSS
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