Gene Nham_2781 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNham_2781 
Symbol 
ID4031039 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrobacter hamburgensis X14 
KingdomBacteria 
Replicon accessionNC_007964 
Strand
Start bp3066835 
End bp3067779 
Gene Length945 bp 
Protein Length314 aa 
Translation table11 
GC content62% 
IMG OID637971232 
ProductNAD-dependent epimerase/dehydratase 
Protein accessionYP_578018 
Protein GI92118289 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1087] UDP-glucose 4-epimerase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACGGGGT CGGATGGCTT TGTCGGCCCT CATATCGAGA AAGCCTTGCG CAGAATCTGC 
GGTGCGGAGA CTGAGATCGT CGCAACCTCG AAGGCTGGTG GCGTGCATCC TCAGCTGGGG
GAAATGCAAG CGCTCGATGT CACCGACGCA GCCGCCGTGC ATGCGACCAT CGCCCGAAAC
GACCCCACCC ATGTGCTGCA TCTTGCGGCA ATCGCCGCTG TTGGTGCAGC CTCCACCGAT
CCCGGGACAG CATGGGCTGT GCATGTCGGC GGGACGCGCA ATCTTGCGCA GGCGCTGCTT
GATCACGCGC CACGTTGTTG GCTGCTCAAT GTCGGATCCG GCCTGATCTA TGGCGAAACA
GCCAAGTCCG GTCGGCTGCT TGACGAAAGC GCCGTGCCGG CTCCTGTCGA TGACTACGGC
GTCACCAAAG CCGCGGCCGA TCTTGCACTC GGGGCGTTGG TACGGCGAGG GCTGAAGGTG
ATACGGCTGC GGCCGTTTAA TCATACAGGG GCCCGCCAGA CCGAAGCCTT TGTGATCCCT
GCGTTCGCGA TGCAGATTGC GCGGATTGAA GCCGGGCAGA TCGAACCCGT CCTGAGAGTT
GGCAACCTTG ACGCCGAACG CGACTTCCTC GATGTGCGCG ACGTTGCGCG CGCTTACGCA
CTGACCGTCC AGCGCTCCGA TTCCCTCGAA CCAGGCCTCA TTTTGAATGT TGCGTCCGGC
ATTCCCCGCC GCATCGGTGA TCTTCTGCTA AAACTCCTGA CGCAAAGCAC CGTGCCGATC
ACGATCGAGC ATGACCCGGA AAGAAGGCGC CCGAGCGACC TGCCACGCAT CATTGGCGAT
GCCACCCGTG CCCGCGAACT TCTGGGGTGG CGCCCTGAAT ATACCCTTGA TGACACACTG
CGTGCGGTCC TCGACGATTG CCGTCGCCGT GCTGCACGAG ACTGA
 
Protein sequence
MTGSDGFVGP HIEKALRRIC GAETEIVATS KAGGVHPQLG EMQALDVTDA AAVHATIARN 
DPTHVLHLAA IAAVGAASTD PGTAWAVHVG GTRNLAQALL DHAPRCWLLN VGSGLIYGET
AKSGRLLDES AVPAPVDDYG VTKAAADLAL GALVRRGLKV IRLRPFNHTG ARQTEAFVIP
AFAMQIARIE AGQIEPVLRV GNLDAERDFL DVRDVARAYA LTVQRSDSLE PGLILNVASG
IPRRIGDLLL KLLTQSTVPI TIEHDPERRR PSDLPRIIGD ATRARELLGW RPEYTLDDTL
RAVLDDCRRR AARD