Gene Nham_2718 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNham_2718 
Symbol 
ID4030151 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrobacter hamburgensis X14 
KingdomBacteria 
Replicon accessionNC_007964 
Strand
Start bp2995047 
End bp2995838 
Gene Length792 bp 
Protein Length263 aa 
Translation table11 
GC content67% 
IMG OID637971171 
ProductABC transporter related 
Protein accessionYP_577957 
Protein GI92118228 
COG category[E] Amino acid transport and metabolism 
COG ID[COG1125] ABC-type proline/glycine betaine transport systems, ATPase components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGCGAAA CCTCGCCGCT GATTGCGTTT TCGCATGTCG CCAAAAATTT CAACGGCGGT 
CGCGTCAGGG CCGTGGACGA TGTCTCGCTC GATATCGCCG CGGGCGAATT TCTCGCCGTC
GTCGGCGGCT CCGGCTCCGG CAAGACGACG CTGCTGCGGC TCGCCAACCG GCTGACCGAT
CCCGACACCG GCACCATCAC CGTTGCGGGA GAGGACATCG CCGGCGTCGA TCCGATCGGG
CTGCGCCGCC GCATCGGCTA TGTGTTCCAG AGCGGCGGCC TGTTTCCGCA CATGAGCATC
GCCGGCAACA TCGGCATCAC GCCGCGCCTG CTCGGGACGC CAAAATCCGA AATCGCCGCA
CGAGTCGACG AACTGCTCGA TCTGGTGCAA CTCGACCGCG CGCAGCACCA CGACCGCTTT
CCGCACGAAT TGTCCGGCGG CCAGCGCCAG CGCGTCGGCG TGGCGCGAGC GCTCGCCGCC
AAGCCGCACA TCGTCCTGAT GGACGAGCCG TTCGGCGCGC TCGATCCGAT GACGCGCGAC
GCGCTCGGCA ACGACTATCG CGCGCTGCAC GCCAGCCTCG GCCTCACCAC CGTGATGATT
ACCCACGACA TGACGGAGGC GCTGCTGCTT GCAGATCGCG TTGCCGTCAT GCGCGAAGGC
CGCCTGCTGG CGTGGGGTAC GCCGGCGGAA TTGTCCCGTA GCGACGATCC TTATGTCGGC
GATCTGCTGG GCACGCCGCG CCGCCAGGCC GAACGACTTC GAGCGGTGCT ATCGCAGAGC
AGCACGTTAT GA
 
Protein sequence
MSETSPLIAF SHVAKNFNGG RVRAVDDVSL DIAAGEFLAV VGGSGSGKTT LLRLANRLTD 
PDTGTITVAG EDIAGVDPIG LRRRIGYVFQ SGGLFPHMSI AGNIGITPRL LGTPKSEIAA
RVDELLDLVQ LDRAQHHDRF PHELSGGQRQ RVGVARALAA KPHIVLMDEP FGALDPMTRD
ALGNDYRALH ASLGLTTVMI THDMTEALLL ADRVAVMREG RLLAWGTPAE LSRSDDPYVG
DLLGTPRRQA ERLRAVLSQS STL