Gene Nham_2701 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNham_2701 
Symbol 
ID4030285 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrobacter hamburgensis X14 
KingdomBacteria 
Replicon accessionNC_007964 
Strand- 
Start bp2975828 
End bp2976547 
Gene Length720 bp 
Protein Length239 aa 
Translation table11 
GC content62% 
IMG OID637971153 
ProductTetR family transcriptional regulator 
Protein accessionYP_577940 
Protein GI92118211 
COG category[K] Transcription 
COG ID[COG1309] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGCTTACTC ACGTCGCCAT GAGCAATCTG CGGATGACCA GCGATCTGCG CCGGGAATTG 
ATTCTGAGCG CCGCGAAGCA ATGCTTTGCG CGCTATGGAT TCGCAGGCAC CACGACCAAG 
AGCGTTGCCG CCGCCGCCTC GATCTCCGAG GCGTTATTGT TCAAACACTT TCCGACCAAG 
TCGGCGCTCT ATGCGGAAAT TCTGGCTGAG GCCTGTCAGG CGGATCCGGC GCTGCATCGC 
TTGCTCGATC GCGAGCCTTC GACGGAAACG CTGGTCGTTC TCATCCGCGG CATGGTCGAG 
CACTTCCTGA ATGCCTCCGC CTCGCCGGAT CAGCAGGAGG CACAACGCCT GCGCCTCATG 
ATCTCAAGCC AGCTCGACGA CGGCGAATTC GCCCGATTGC TGTACGAAAA GATCCGGGAC 
CTGATAGGTC GGGCCTTCAC GACCTCGCTC GAGCGTGCGA TCGCCGCCGG GGATGCGGTG 
CCGGTCGGAC GCGAGCCGCT CAATCTGTTC TGGTTTGCTC ATCACACGGT TCTCATGATG 
GTTCTGACCA AGCTTCCCTC CGTTCCGACC CTGTCGTACG GCGCCGCGCC CGGCCTGGAG 
CGGCAGATCT GTGAATTCAT TCTTCGCGGA GTCGGCCTGA ACGCAGCGGC GATTGCCTTG 
CATCTGGACA AGCAACCTGT ATTCAACGCC GCCCACGCGC CGGCCGCAGA AAGTGCATGA
 
Protein sequence
MLTHVAMSNL RMTSDLRREL ILSAAKQCFA RYGFAGTTTK SVAAAASISE ALLFKHFPTK 
SALYAEILAE ACQADPALHR LLDREPSTET LVVLIRGMVE HFLNASASPD QQEAQRLRLM 
ISSQLDDGEF ARLLYEKIRD LIGRAFTTSL ERAIAAGDAV PVGREPLNLF WFAHHTVLMM 
VLTKLPSVPT LSYGAAPGLE RQICEFILRG VGLNAAAIAL HLDKQPVFNA AHAPAAESA