| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Nham_2685 |
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| Symbol | |
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| ID | 4032383 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nitrobacter hamburgensis X14 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007964 |
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| Strand | - |
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| Start bp | 2953114 |
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| End bp | 2953992 |
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| Gene Length | 879 bp |
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| Protein Length | 292 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 637971137 |
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| Product | squalene/phytoene synthase |
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| Protein accession | YP_577924 |
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| Protein GI | 92118195 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG1562] Phytoene/squalene synthetase |
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| TIGRFAM ID | [TIGR03464] squalene synthase HpnC |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCCCACCG CGAATCAACT GCGATCCGGA AAGACCCACC GCGACGAGAA TTTTCCGGTC
GCGTCGTGGA TCATTCACCC GCGTCACCGC GCGTTGATTC TCGCGTTCTA CAATTTCGTC
CGGACCGCGG ACGACATCGC CGATCACGCC GAACTCGGCG AGAAGGACAA GCTCGCCTGG
CTCGATCTGT TCGAGAGCGA ACTCCTGGGG CAGGGCAATA GCCAGCCGGA AGCGGTCAAT
CTTCGAAATG CGCTGGCGCA ACGGTCGATG CCGCCGCGCC ACGCCATCGA CGTGCTGAAG
GCGTTCCGGA TGGACGTCAC CAGGCTGCGC TACGAAACTT GGGACGAGGT GATCGACTAT
TGCCGTTATT CGGCGATGCC GGTCGGACGT TTCATGCTCG ACGTGCACGG CGAGAACACG
TCGACCTGGG CCGCATCCGA CGCGCTATGC GCCGGCCTGC AGATCAACAA CCATCTTCAG
GATTGCGCCA AGGACTACAA GAATCTCAAC CGCGTTTATC TGCCGCGCGA TGCGCTGGCC
GCATCCGGTG CCTCGGTCGA GATGCTCGGC GGCGATAAGG CAACGCCTGC GCTCCTGCAA
TGCCTGCACG CCCTTGCCGC GCGAACCGAA GCGCTGCTCG ACGAGGGACG GCCGCTCGCG
GCCGAGATCA GGGACATCCG CCTCGGGCTT GAAGTCGCCG TGATCCGGAT GTTCGCCGAC
GGGATTGTCG CGCTGCTAAA GGTACGTGAT CCCCTGAGCG AGACGGTTCA CCTCAAGCCG
GTGCAACTGC TCGGCTACAG TGTTGCCGGC ATCACCGCGG AGATGCTTCG CCGCTCGGTA
CGGCGGCGGC CGGTGTCGAA TCCGGCGGCC GGCGCATGA
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| Protein sequence | MPTANQLRSG KTHRDENFPV ASWIIHPRHR ALILAFYNFV RTADDIADHA ELGEKDKLAW
LDLFESELLG QGNSQPEAVN LRNALAQRSM PPRHAIDVLK AFRMDVTRLR YETWDEVIDY
CRYSAMPVGR FMLDVHGENT STWAASDALC AGLQINNHLQ DCAKDYKNLN RVYLPRDALA
ASGASVEMLG GDKATPALLQ CLHALAARTE ALLDEGRPLA AEIRDIRLGL EVAVIRMFAD
GIVALLKVRD PLSETVHLKP VQLLGYSVAG ITAEMLRRSV RRRPVSNPAA GA
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