| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Nham_2666 |
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| Symbol | dnaE2 |
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| ID | 4032440 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nitrobacter hamburgensis X14 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007964 |
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| Strand | - |
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| Start bp | 2929465 |
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| End bp | 2932959 |
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| Gene Length | 3495 bp |
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| Protein Length | 1164 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 637971118 |
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| Product | error-prone DNA polymerase |
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| Protein accession | YP_577905 |
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| Protein GI | 92118176 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0587] DNA polymerase III, alpha subunit |
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| TIGRFAM ID | [TIGR00594] DNA-directed DNA polymerase III (polc) |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.466935 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAGCATC CGCGCGACAT TCCATCCTAT GCCGAAATCG GCATCGCCAC CAATTTCTCG
TTCCTGCATG GCGCGTCGCA TCCGCAGGAA TATGTCCATC AGGCGAGCGA ATTGCGGTTG
CCCATCATCG GCATCGCCGA CCGCAATACG CTGGCGGGCG TGGTGCGTGC TTATGCGGAG
CTGGGAAATC CCGAACTTCG CTCCAAGCCG CGGCTGCTGA TCGGATCGCG TCTCGTTTTT
ATCGATGGAA CGCCGGACAT CCTCGTCTAC CCCCGCGATC GCGATGCTTA TGGCCGGTTG
TGCCGATTGC TGACGCGCGG CAAGCGGGCG GCGGAGAAGG GCGAATGTCA TCTGGGGCTG
GATGACCTCT TGGAATTTTC GGAAGGGCAG CTTCTCGTGC TGACCTTGCC GCATCGTTTC
GACACGACGA CCGCGCTGAA GGTGCTGGAC CGGTTGCGGC AGAGCCGCGC GGCCGGTGTC
TGGCTCGCGG CAAGCCTGCT CTATCGCGGC GACGACCGGC GCCGCCTGCT GCGATTGCGG
CGGATCGCGA CCGCCGCCCG CGTGCCGCTG CTTGCGACCA ACGAGGTGCT ATATCATCAC
CCCGCACGTC GCCCGTTGCA GGATGTGCTG ACCTGCATTC GCGAAAAGGC AACTGTCCAT
GCCATCGGCA GGAAGCTGGA AGCCAACGCA GAACGATATC TCAAGCCGAC GGATGAGATG
GCACGGCTGT TTCGCGATAT TCCCGAAGCG ATCGCCGAAA CCGTGACGCT CGCGTCGCGC
ATCGCATTCA CGCTCGACCA GCTCAAATAT CAGTATCCCG ACGAACCGGT GCCGCCGGGC
AAGACGGCGC AGCGTCGTCT CGAGGATCTG ACATGGGCAG GCGCTCACAA ATATTTTCCG
GTGCGCATTC CGCCCAAGAC CAGGAAGGTC CTGCACAAGG AGTTGCGGCT GATCCGGCAG
CTCAACTACG CGCATTACTT CCTCACCGTG CACGACATCG TGCACTGGGC GCGCAGCCGG
AACATCCTTT GCCAGGGGCG GGGCTCGGCG GCGAATTCGG CCGTGTGCTA TGTGCTCGGC
ATCACCGCGG TCAATCCGGC CGAGACCGAT CTGCTGTTCG AGCGCTTCAT CTCCAAGGAG
CGGCTGGAGC CGCCGGATAT CGACGTCGAT TTCGAGCATT CGCGTCGCGA GGAGGTGATG
CAGTATGTCT ATCGCCGCTA CGGCCGCCAC CGCGCCGCGA TCATCGCCAC CGTCATTCAC
TATCGGCCGC GCAGCGCCAT TCGCGATGTC GGCAAGGCGC TGGGGCTGAC CGAGGATGTC
ACGGCGGCGC TCGCCGATAC GGTGTGGGGA AGTTGGGGCG ATGGTGTCAG CGACATGCAG
GTCAGGCAGG CGGGGTTCGA TCCGCGAAAC CCCATGCTGC GCCGCGCCGT TGCGCTCGCC
ACCGAGTTGA TCGGCTTCCC GCGCCACCTG TCGCAGCATG TCGGCGGCTA TGTGCTGACG
CAGGACCGCC TCGATACCTA TGTGCCGATC GGCAATGCCG CGATGGACGA CCGCACCTTC
ATCGAGTGGG ACAAGGACGA TGTCGATGCG CTTCGGATGA TGAAGGTCGA CGTACTGGCG
CTGGGGATGC TGACCTGCAT CCGCAAGTGC TTTGACCTCA TCGCCAGGCA CAAGGGCAAG
CGATGGGAGT TGGCGACGGT TCCGCGCGAG CAGCGGGAAG TCTACGACAT GCTGTGCAAG
GGCGAGTCCC TCGGCGTGTT TCAGGTCGAG AGCCGGGCGC AGATGAACAT GCTGCCGCGG
CTGAAGCCGC GCACGTTCTA CGATCTCGTC ATCGAGGTCG CCATCGTCCG CCCCGGTCCG
ATCCAGGGCG ATATGGTGCA TCCCTATTTG AAGCGGCGGG CCATGAAGCC TGAGGATATC
GACTATCCCT ATCCGAAGGG CGGCGACAGG AATGAACTGC GCAACGTGCT GCACAAGACG
CTCGGCGTTC CGCTGTTTCA GGAGCAGGCG ATGCGCATCG CCATCGAAGC CGCGAAATTC
ACCTCCCAAG AGGCCAACGG CCTGCGCCGC GCCATGGCTA CATTCCGCAA CGTGGGAACC
ATTGGCACAT TTCAGGAGAA GATGGTCAAC AGCATGATCG CCCGCGGTTA CGATCCGGTG
TTCGCGAAAA ACTGTTTCGA GCAGATCAAG GGCTTCGGCT CCTACGGTTT CCCCGAAAGC
CACGCGGCGA GCTTTGCCCA GCTTGTCTAT GTCTCGTCAT GGCTGAAGCG TTTCCATCCC
GATGCATTCT GCTGTGGCCT GCTGAATTCG CAGCCGATGG GTTTTTACGC GCCGGCGCAG
ATCGTCGGCG ATGCCCGCAA GAACGGCGTC GCGGTGCGGC CCATCGATGT ATCGTTCAGC
TATTCGCAGA ACACGCTGGA AGAGCGCGCA GGCAGGCATT ACGCGATGCG GCTCGGCTTT
CGCCAGATCG ACGGCTTCAA GTGGGTTGAT AAGGATGAAG CGAAGCTGAA ACAGGATCAA
GCAAAGCATC TCTCGTCTGC GTCGTCCCCG CGAACGCGGG GACCCATAAC CCCTGTGCTC
AATGAGTTTT CGACGCATGT CTCCGGCCAT AGCGAGCGTC TTGCTCTATC GCAGGCGGAA
CGGAGTAAGG GTCCCCACGT TCGCGGGGAC GACGAGACGC TGTGCGCAGG CGACTGGGGC
GAGCGGATCG TCGCCGCGCG TCAACGCCGG CCCTTCACCT CCATCGAGGA TTTTGCTCGC
GATACCAAAC TGCCGAAGCG CGCGTTGATC CTGCTGGCCG ATGCCGATGC CTTTCGCTCG
CTCGGGCTCG ACCGCCGCGC GGCGCTGTGG GCGGTGCGCC GCCTGCCGGA CGACGTGCCG
CTGCCATTGT TCGAAAGCGC CATCGCGCGC GAGCTGCCCG ACGAACGCGC CGCGCCGCTG
CCTCAGATGC CGCTGCCGGA GCAGGTGGTC GCCGATTACC AGACCGTACG GTTGTCGCTG
AAGGGCCATC CGATGGAATT CCTGCGCACG ATGCTCACCC GCGAGCGCGT GGTGAGTTGC
GCCGAGGTTT GCCATGCCAA CGACAAACGC CGCGTCAGAT GTGCCGGCGT GGTGCTGGTG
CGGCAGCGGC CGGGCAGTGC CAAGGGGGTG GTGTTCATGA CGCTGGAAGA CGAGACCGGC
ATCGCCAATA TCGTGGTGTG GCCGAACATC ATGGCGCGCT ACCGCAAGGA GGTGATGGGC
GCGCGGCTGA TCGAGGTGGA AGGCACTATC CAGAGCAGCC CGGAGCAGGT CGTGCATCTT
GTCGCAAGCA AGCTGACCGA TCGCTCCACT GAGCTGATGC ATCTGGCGAA CGATGCGCTC
GTGTCCAGGT ATCCGCTGCC GCCGCCGGCC GCACCGCTCG ACGACGACCG CCGTGATCAT
CCCGACAATC CAGCGCAACG AGTCCGCCAT CCGCGCAACG TGCGCATCCT GCCGCGCTCA
CGGGATTTTC ATTGA
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| Protein sequence | MKHPRDIPSY AEIGIATNFS FLHGASHPQE YVHQASELRL PIIGIADRNT LAGVVRAYAE
LGNPELRSKP RLLIGSRLVF IDGTPDILVY PRDRDAYGRL CRLLTRGKRA AEKGECHLGL
DDLLEFSEGQ LLVLTLPHRF DTTTALKVLD RLRQSRAAGV WLAASLLYRG DDRRRLLRLR
RIATAARVPL LATNEVLYHH PARRPLQDVL TCIREKATVH AIGRKLEANA ERYLKPTDEM
ARLFRDIPEA IAETVTLASR IAFTLDQLKY QYPDEPVPPG KTAQRRLEDL TWAGAHKYFP
VRIPPKTRKV LHKELRLIRQ LNYAHYFLTV HDIVHWARSR NILCQGRGSA ANSAVCYVLG
ITAVNPAETD LLFERFISKE RLEPPDIDVD FEHSRREEVM QYVYRRYGRH RAAIIATVIH
YRPRSAIRDV GKALGLTEDV TAALADTVWG SWGDGVSDMQ VRQAGFDPRN PMLRRAVALA
TELIGFPRHL SQHVGGYVLT QDRLDTYVPI GNAAMDDRTF IEWDKDDVDA LRMMKVDVLA
LGMLTCIRKC FDLIARHKGK RWELATVPRE QREVYDMLCK GESLGVFQVE SRAQMNMLPR
LKPRTFYDLV IEVAIVRPGP IQGDMVHPYL KRRAMKPEDI DYPYPKGGDR NELRNVLHKT
LGVPLFQEQA MRIAIEAAKF TSQEANGLRR AMATFRNVGT IGTFQEKMVN SMIARGYDPV
FAKNCFEQIK GFGSYGFPES HAASFAQLVY VSSWLKRFHP DAFCCGLLNS QPMGFYAPAQ
IVGDARKNGV AVRPIDVSFS YSQNTLEERA GRHYAMRLGF RQIDGFKWVD KDEAKLKQDQ
AKHLSSASSP RTRGPITPVL NEFSTHVSGH SERLALSQAE RSKGPHVRGD DETLCAGDWG
ERIVAARQRR PFTSIEDFAR DTKLPKRALI LLADADAFRS LGLDRRAALW AVRRLPDDVP
LPLFESAIAR ELPDERAAPL PQMPLPEQVV ADYQTVRLSL KGHPMEFLRT MLTRERVVSC
AEVCHANDKR RVRCAGVVLV RQRPGSAKGV VFMTLEDETG IANIVVWPNI MARYRKEVMG
ARLIEVEGTI QSSPEQVVHL VASKLTDRST ELMHLANDAL VSRYPLPPPA APLDDDRRDH
PDNPAQRVRH PRNVRILPRS RDFH
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