Gene Nham_2660 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNham_2660 
Symbol 
ID4029521 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrobacter hamburgensis X14 
KingdomBacteria 
Replicon accessionNC_007964 
Strand
Start bp2922216 
End bp2923334 
Gene Length1119 bp 
Protein Length372 aa 
Translation table11 
GC content64% 
IMG OID637971112 
Producthypothetical protein 
Protein accessionYP_577899 
Protein GI92118170 
COG category[S] Function unknown 
COG ID[COG5330] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCTTCCA AATCGGCCGC CCCCTCGGCA GGTCTACTCG ACGAACTTCA GAACACCCTC 
GCCCATGGCA CCGTCACGCG GCGGGTTGAA ACGCTGCGGC GGGTCACCGA CCTGTTCCTG
AACAACACGG TCGACTATTC CGACGAGCAG ATCACGGTCT TTGACGACGT GTTCAATTGC
CTGAGCCGGC ACATGGAAAC CGCGGCGAAA GTGCTGCTTG CCAGGCGCCT CGCTCCCGTT
GCCAAGGCTC CGCCGCAGAT CATTCACGCA CTCGCCTTCG ACGATCTGAT CGAAGTCGCC
GCGCCCGTGC TGTCGCAATC CGAACGGCTA GGAGATGACG CGCTGGTCGA GAACGCCCGC
AGCAAGAGCC AGGCGCATCT GCTGGCGATC TCGACGCGGA AGGTCCTGAG CGGGGCGGTC
ACCGACGTTC TGGTGGAGCG CGGCAACGAC GAGGTCGTCA GAAGCACCGT CAACAATCCG
GGCGCCGAAT TCTCCGAGCA GGGCTTCACG CGGCTGGTTG CGCGCGCCGA AGGCGACGAC
GAGATCGCAA CCTGCGTCGG CATGCGGCCG TCGATCCCGC GGCATCACTA TCTGAAGCTG
ATCGCGAAAG CCTCCGCCTC GGTGCGGGCG CGTCTCGCGG CGGCCAATCC GCATCGGGCG
GACGATGTGT CGGTTGTTGT CAGCGAGGTG GCGCGGCGGG CGCGCTCGGC GCCGGCGGCC
ATCAGCAGGG AAACGACCAT CGCGCACGGG CTGGTCAGAT CGCTGTACGA AGACGGCCGT
CTCGACGAGC ATGAGGTCGC TTCGTTTGCG CAAGCCGGTA AATTCGACGA AACCAACGCC
GCCATCGCCT GCCTCGCCAA CGTCTCGGTC GCGGTCGCCG AGAAAATGAT GATCGAATCC
CAAACCGAGG GCGTGCTCAT TCTGGCCAAG GTGGGCGGCC TGTCCTGGTC GACCGTCAAA
GCCATCATCG ACATGCGCAA GGACCTCGCG GACATCGCGG TGACGGATAT CGATGCTGCG
GAACGCATGT ATGAACGTCT GCGCCTGTCC ACTGCGCAAC AGGTGCTGCG CTTCCATCGG
ACGCAGCAAG CAGCCGCTCC GGGCCTGGAC AGCACTTAA
 
Protein sequence
MASKSAAPSA GLLDELQNTL AHGTVTRRVE TLRRVTDLFL NNTVDYSDEQ ITVFDDVFNC 
LSRHMETAAK VLLARRLAPV AKAPPQIIHA LAFDDLIEVA APVLSQSERL GDDALVENAR
SKSQAHLLAI STRKVLSGAV TDVLVERGND EVVRSTVNNP GAEFSEQGFT RLVARAEGDD
EIATCVGMRP SIPRHHYLKL IAKASASVRA RLAAANPHRA DDVSVVVSEV ARRARSAPAA
ISRETTIAHG LVRSLYEDGR LDEHEVASFA QAGKFDETNA AIACLANVSV AVAEKMMIES
QTEGVLILAK VGGLSWSTVK AIIDMRKDLA DIAVTDIDAA ERMYERLRLS TAQQVLRFHR
TQQAAAPGLD ST