Gene Nham_2623 details

Gene Information

• Locus tag: Nham_2623
• ID: 4032823
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Nitrobacter hamburgensis X14
• Kingdom: Bacteria
• Replicon accession: NC_007964
• Strand: -
• Start bp: 2881842
• End bp: 2883686
• Gene Length: 1845 bp
• Protein Length: 614 aa
• Translation table: 11
• GC content: 65%
• IMG OID: 637971078
• Product: multi-sensor signal transduction histidine kinase
• Protein accession: YP_577865
• Protein GI: 92118136
• COG category: [T] Signal transduction mechanisms
• COG ID: [COG0642] Signal transduction histidine kinase
• TIGRFAM ID: [TIGR00229] PAS domain S-box

Plasmid Coverage information

• Num covering plasmid clones: 15
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

TTGACCATCA TCCAGGACTG CCTCGACGCC CTGCTGCATC CGTCGGCGCG ATACGACGCG 
TTGACGCGGG CGCGTCATCG CGCGTTCATG GGACCGCGTC TTCTGGGAAG TCTCGTCGCG 
CTCGCGGCGT TTCCGGTCTA TCTCGCGATC CGCGGCGCGC CGACGGCGCT TGAGGTAGCG 
GCTTTCGCCT GGCTCGTCGT ACCGATTCTG CTGTCTTATT TCCTGTCGCG AACCGGCCGC 
TACGAAGGCG CGCACGTGCT GTCGTCAACC GCGCTCGCCG GCCTCGTCAT GATGATCGCG 
ATCGCAACCG GCGGGATCGA ATCGTTCGCA ACCGTCTGGC TTGTCGTGAT TCCGCTGGAG 
GCGGCACTGT CCGCGTCCCG CCGCGTCGTC ACGTTTGCCT CGATGCTGGC GCTAGCATGC 
TTGCTTGCAC TGATCGCGAT GAACTACTTC GGCGTTTTGC CGCCGCTCGA CGCCGGCGCG 
GCGCACGGCG TCTTCATGGC CTTCGGTATT GCGTCCGCAA CGCTCTATGC CGCGGGGGTG 
GCGTTCGGCT CCGAAGCGCT GGCGCGTACC GGCACTTCGC TGCTGAACGT CGAGGAAGAC 
CGCTATCGCC TGCTGGCGCG CAACATGTGC GATGTGATTT CGCGCCACAG GCGCAACGGC 
GCCGTCCAGT TCATTTCGCC GGCCGCGGAA GCTCTGCTCG GCGTACCGGC GTCGGAATTG 
CAGGACCATG GCCTGTTCGA TCGGGTCCAC GTCGCCGATC GCCCGGCCTA TCTCACCGCG 
CTCGCGGCGG CTGCGCTCGG CAACGACGGG CAGAGCGTCG AATTCAGGCT CAGGCGCGAC 
GTCGCGCGTG CTTCGCAGGG AGAGGCGCGC CATTCGGCCG ACTTCATTTG GGTGGAAATG 
CGGTGCCGGC CGCTTGAGCC GGCCTCCGCC GCCGGAACGT CCGCCGAACC CGAAGTTGTC 
GCGGTGATGC GCGATATCAC CGAGCGGAAG CATCAGGAGC ACGCGCTGGA TCTGGCGCTT 
ACCACCGCCG AACGCGCCGA TGCCGCCAAG ACCCGGTTTC TCGCGACCAT GAGCCACGAG 
CTGCGAACGC CGCTCAATGC CATCATCGGA TTTTCGGAGA TGATGGTTCA GGAGGATGCC 
CTGTCGCTCG ATGCGGCGCG GCGCAAGGAG TATGCCCAGC TCATCAACGA TTCCGGCCAG 
CATCTGTTGT CGGTGGTCAA CAGCATCCTC GACATATCGA AAATGGAATC CGGAAACTTC 
GAGATCTTGC CCGAGCCGTT CGCACCGCGC GAGGTGTTGC TCAACAGCAG CAACCTGCTC 
GCGCTCAAGG CCCGCGACAA CGGCATCGAG CTCGTCACCC GCGTTCCGGA GGATTTGCCG 
CAGATCACCG GCGATCCGCG CGCGTTCAGA CAGATCGTTT TGAATCTGGT CTCGAATGCC 
GTCAAGTTCA CCGAGCGCGG CGGCCGGGTC ACGATCTCGG CGCGCGTCGA AGGATCGCGC 
ATGGTGTTGC GCGTGATGGA CAACGGCGTC GGCATCGCGC AGGAAGACCT CAAGCGGATC 
GGCGACCCCT TCTTCCAGGC TGGGAAAACC TACCAGCGGC GCCATGAAGG GACCGGACTC 
GGGCTGTCGA TCGTCAAGAG CCTCGTTGCG TTGCACCGGG GCGAGATCGA TGTGCAGAGC 
AAGGTGGAGG AGGGGACCAC GGTGACCGTC ATGTTGCCGC TGACATTCGT GCCCGGCGTC 
GACGTGTCCG AAGCCGAGCC GGCATCGGAC AATATCGCGA CGCTGACGCC CGCACCGCGC 
CCCGGCAAGC AGGATCAAGG TTATCGGGTG AAGAAGAGTG CCTAG 

 

Protein sequence

MTIIQDCLDA LLHPSARYDA LTRARHRAFM GPRLLGSLVA LAAFPVYLAI RGAPTALEVA 
AFAWLVVPIL LSYFLSRTGR YEGAHVLSST ALAGLVMMIA IATGGIESFA TVWLVVIPLE 
AALSASRRVV TFASMLALAC LLALIAMNYF GVLPPLDAGA AHGVFMAFGI ASATLYAAGV 
AFGSEALART GTSLLNVEED RYRLLARNMC DVISRHRRNG AVQFISPAAE ALLGVPASEL 
QDHGLFDRVH VADRPAYLTA LAAAALGNDG QSVEFRLRRD VARASQGEAR HSADFIWVEM 
RCRPLEPASA AGTSAEPEVV AVMRDITERK HQEHALDLAL TTAERADAAK TRFLATMSHE 
LRTPLNAIIG FSEMMVQEDA LSLDAARRKE YAQLINDSGQ HLLSVVNSIL DISKMESGNF 
EILPEPFAPR EVLLNSSNLL ALKARDNGIE LVTRVPEDLP QITGDPRAFR QIVLNLVSNA 
VKFTERGGRV TISARVEGSR MVLRVMDNGV GIAQEDLKRI GDPFFQAGKT YQRRHEGTGL 
GLSIVKSLVA LHRGEIDVQS KVEEGTTVTV MLPLTFVPGV DVSEAEPASD NIATLTPAPR 
PGKQDQGYRV KKSA