Gene Nham_2588 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNham_2588 
Symbol 
ID4031779 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrobacter hamburgensis X14 
KingdomBacteria 
Replicon accessionNC_007964 
Strand
Start bp2846307 
End bp2846912 
Gene Length606 bp 
Protein Length201 aa 
Translation table11 
GC content58% 
IMG OID637971043 
ProductDSBA oxidoreductase 
Protein accessionYP_577830 
Protein GI92118101 
COG category[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG3917] 2-hydroxychromene-2-carboxylate isomerase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.0787884 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATCGAAT TCTTCTTCGA TTGTTCCAGT CCATGGACCT ATCTCGCTTT CCACAATATC 
CAGCCGCTGG CGAAAGAATT TGGCGAACAG ATCTCGTGGC GGCCGATTCT GGTCGGCGGA
ATATTCAATA CCGTCAACCC GAGCGTCTAT GCTTCGCGGG AAAAACCCGT GGCGGCGAAA
GACCGCTATA TGAAGAAAGA TCTCGCGGAC TGGGCGCGAG TGGCGGGGCT CGCGATCAAG
ATGCCACCGA CGGTGTTTCC GGTGAACAGC GTCAAGGCGA TGCGCGGCTG TCTCTGGCTT
GGCAACGGTG CGATGGTTCC GTTCGCCACG TCGGTGTTCG AAGCCTATTG GCGCGATGAC
AAGGACATCT CGCGTGAGCC GGTGCTGGCC GATATTTGCA AATCGCTCGA GATCGATCCG
GAAAAGCTTC TGACCGGCAT CGGCGATGAA GGCGTCAAGA ACGAACTCAA GGCGAATACC
GACGAGGCGA TCGCGCGCGG CGTGTTCGGG TCGCCGACGA TCTTCCTTAA CAAGACCGAT
ATGTATTTCG GCAACGACCG CTTGCCGCTG ATCCGCGAAG CGCTGCAGCG GAAGAAGGCC
GCGTGA
 
Protein sequence
MIEFFFDCSS PWTYLAFHNI QPLAKEFGEQ ISWRPILVGG IFNTVNPSVY ASREKPVAAK 
DRYMKKDLAD WARVAGLAIK MPPTVFPVNS VKAMRGCLWL GNGAMVPFAT SVFEAYWRDD
KDISREPVLA DICKSLEIDP EKLLTGIGDE GVKNELKANT DEAIARGVFG SPTIFLNKTD
MYFGNDRLPL IREALQRKKA A