Gene Nham_2423 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNham_2423 
SymbolpanC 
ID4030366 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrobacter hamburgensis X14 
KingdomBacteria 
Replicon accessionNC_007964 
Strand
Start bp2685278 
End bp2686129 
Gene Length852 bp 
Protein Length283 aa 
Translation table11 
GC content63% 
IMG OID637970882 
Productpantoate--beta-alanine ligase 
Protein accessionYP_577673 
Protein GI92117944 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0414] Panthothenate synthetase 
TIGRFAM ID[TIGR00018] pantoate--beta-alanine ligase
[TIGR00125] cytidyltransferase-related domain 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCCACGCG CCCCCGCTAT TGCACGCACC CTTCCCTCGC TGCGCCGCGC CCTGGAGGGT 
TTGCGGGCGC GCCGGGCAAC CGTCGCTTTG GTGCCGACCA TGGGTGCGCT TCACGACGGG
CATCTGGCGC TGGTGCGTCA GGCAAAGCGG CGCGCGTCAA AGGTTGTCGT CTCGATTTTC
GTCAACCCGA CCCAGTTCGC GCCGCACGAA GATTTCGGAT CGTATCCCCG GACCTGGAAG
GCCGATATGG CCAAACTCGC GGAAGCGCGC GTCGATCTGG TCTGGAATCC GGACGTCGGC
ACGATGTATC CGCCGGACTT CGCGACCCGG ATATTGACTG AAGGACCAGC AATGGCAGGT
CTTGAAGATC GTTTCCGGCC GCATTTTTTC GGCGGCGTCG CGACCGTCGT CGGTAAGTTG
TTCGCGCAGT GCCGGCCGGA TGTCGCCCTG TTCGGCCAGA AGGACTATCA GCAGTTCAAG
GTGGTGACAC GAATGGCCAC CGATCTCGAT CTCGGCGTCA AGATCATCGG GGTTCCGATC
GTGCGCGAAC GCGACGGGCT CGCGATGTCG TCGCGCAACG CCTACCTGTC AGCGGAGCAG
CGCGCCGTTG CACCGACACT CCATCGCGTC ATGAAGGATG CCGCCAAACG GCTGCGCAAC
GGCGACGATC TCGAAACCGT CATGGCCGAC GGTGCAGGCA CGATCGTAGA CGCGGGCTTC
GCGCTGGATT ACTTCGAGGC GCGTCACGCT GAAACGCTGG CTCCGGTCCG CTCGATCAAG
GACGGACCAG TCCGGCTTCT GGTGGCGGCA AAAATCGGAA CGACCCGACT GATCGACAAT
ATCGGTGTTT AG
 
Protein sequence
MPRAPAIART LPSLRRALEG LRARRATVAL VPTMGALHDG HLALVRQAKR RASKVVVSIF 
VNPTQFAPHE DFGSYPRTWK ADMAKLAEAR VDLVWNPDVG TMYPPDFATR ILTEGPAMAG
LEDRFRPHFF GGVATVVGKL FAQCRPDVAL FGQKDYQQFK VVTRMATDLD LGVKIIGVPI
VRERDGLAMS SRNAYLSAEQ RAVAPTLHRV MKDAAKRLRN GDDLETVMAD GAGTIVDAGF
ALDYFEARHA ETLAPVRSIK DGPVRLLVAA KIGTTRLIDN IGV