Gene Nham_2408 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNham_2408 
Symbol 
ID4030621 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrobacter hamburgensis X14 
KingdomBacteria 
Replicon accessionNC_007964 
Strand
Start bp2668960 
End bp2669724 
Gene Length765 bp 
Protein Length254 aa 
Translation table11 
GC content62% 
IMG OID637970868 
Productphage-encoded protein-like 
Protein accessionYP_577659 
Protein GI92117930 
COG category[S] Function unknown 
COG ID[COG3646] Uncharacterized phage-encoded protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.665477 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCGATCCG CAGTATCCGC GCACAGCCAG TCATCGACTG TCCCGGCGCT TCACCTTCCA 
GCAACCGCCG CACAGCCCAC CCCGTTCGCC ACTGGCGTCG CGCCGACGAT GTCGAGCCGC
GAGATCGCGG AGCTGGTCGA GAGCCGGCAC GACAGCGTCA AGCGCACGGT CGAACGCCTG
GTTGAGCGGG GTGTAATCGG TCTTCCACCA ACGGTGGAAT ACCCCGACAC GCTAGGGCGG
AAGGCTACTG AGTACCGGAT AGGCAAGCGC GACAGCTACA TTGTCGTCGC CCAACTCTCC
CCGGAGTTCA CTGCCCGGCT CGTCGACCGC TGGCAGGAGC TGGAGTCCAC CAGTGGCCGC
GCCCTACCGC AATCCTTTGC CGATGCCTTG CAGCTCGCGG CAGACCAAGC GCGTCAGATC
GAACAACAGC ACACGCTACT CATTGAGCAA CAGCCTAAGG TCGAGTTTTA CGACCAGTTC
GTAAAAGCCG ATGGCTTGCT CGGGTATCAA GAAGCTGGCA CCGCCGCCGG CTGCTACCCG
AACAAGTTCT GCAACTGGCT GAAGATCGAC CATCTGTTTT ATCGCGGCAA GAAGTTGATG
CCGCGGTCGC AATTCGTCCG CCGTGGTCTT TTTGAGATCC GGCCAGAACT CGACGCCAAC
GGCGAGTCGC ATCTGCGGGG CTGGGTTACG GCGAAAGGCG TCGAGCATTT TGCAAAGCAT
GCTCCCGACT GGATTCGGAT CACCCCGCGG GAGGTGAAGC CGTGA
 
Protein sequence
MRSAVSAHSQ SSTVPALHLP ATAAQPTPFA TGVAPTMSSR EIAELVESRH DSVKRTVERL 
VERGVIGLPP TVEYPDTLGR KATEYRIGKR DSYIVVAQLS PEFTARLVDR WQELESTSGR
ALPQSFADAL QLAADQARQI EQQHTLLIEQ QPKVEFYDQF VKADGLLGYQ EAGTAAGCYP
NKFCNWLKID HLFYRGKKLM PRSQFVRRGL FEIRPELDAN GESHLRGWVT AKGVEHFAKH
APDWIRITPR EVKP