Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Nham_2305 |
Symbol | |
ID | 4029677 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Nitrobacter hamburgensis X14 |
Kingdom | Bacteria |
Replicon accession | NC_007964 |
Strand | - |
Start bp | 2561079 |
End bp | 2561501 |
Gene Length | 423 bp |
Protein Length | 140 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 637970766 |
Product | endoribonuclease L-PSP |
Protein accession | YP_577557 |
Protein GI | 92117828 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0251] Putative translation initiation inhibitor, yjgF family |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.220286 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCCCGGCA AGCTGGAAAA GCAGCACTTT CAATATGCGG GATGGTCGAA GACCTCGTTT TCCGAGGTCG TCAGCGTCAA GGGGCCGGGG AGACTGCTGT TCCTGTCGGG AATCGGCGCC GAGGACACGG GCGACGCGCC GGGTGTGATC CACCATCCCG GCGACGTCTA CCAGCAAACG CGGCTGGCTT ACGAGAAAGC GGCGGCGGTG CTTGCCAGGC ACGGCGCGAC GCTTGCCGAT GTCGTCAAGA TCAGCGCCTA CCTGCTCGAC GTGCGCGAGG CGCCAAACTA TCACCGCGCC CGCGCCGAGG CGTTTAAGGA TGCGCCCGGC CTGCCGGCGC ACACTTTTTT GTTCATCAAC AATCTGGCGT GGCCCGGCAT GTTGGTCGAG GTCGATCTCA CTGCTGTGGT GGCCGAGAGC TAA
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Protein sequence | MPGKLEKQHF QYAGWSKTSF SEVVSVKGPG RLLFLSGIGA EDTGDAPGVI HHPGDVYQQT RLAYEKAAAV LARHGATLAD VVKISAYLLD VREAPNYHRA RAEAFKDAPG LPAHTFLFIN NLAWPGMLVE VDLTAVVAES
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