| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Nham_2272 |
|---|
| Symbol | |
|---|
| ID | 4032542 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Nitrobacter hamburgensis X14 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007964 |
|---|
| Strand | - |
|---|
| Start bp | 2526084 |
|---|
| End bp | 2527199 |
|---|
| Gene Length | 1116 bp |
|---|
| Protein Length | 371 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 59% |
|---|
| IMG OID | 637970733 |
|---|
| Product | transposase IS116/IS110/IS902 |
|---|
| Protein accession | YP_577524 |
|---|
| Protein GI | 92117795 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG3547] Transposase and inactivated derivatives |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 9 |
|---|
| Plasmid unclonability p-value | 0.0142849 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGCAGGATT ATAGAGAAGC TTTTGTCGGG ATCGATGTTG CCAAACTGAA GAATGCGGTC
GCGGTTGCAG ACGGCGGCCG AAACGGAGAG ATCCGTTATT TCGGTGAAGT CGAGTCATCG
GACGCGAGTA TGCGCCGGGC GATCCAGCGA ATCGCCTCAA GATTTGACCA CGTATATTTT
TGTTATGAGG CTGGTCCCAC CGGTTATGGC CTATATCGGT TGATCCGTTC GCTCGGTTAC
GACTGCTTAG TGGTCGCCCC GTCGTTAATC CCAAGGAAGC CGGGCGATCG GGTGAAGACA
AACCGGCGGG ACTCGCTATC GCTCGCCCGG CTGTTGAGGG CCGGCGAGCT GACGGCGGTA
TGGGTTCCGG ACGAGGGTCA TGAGGCCATG CGGGATCTTG TGCGCGCTCG TGCGGCCGCC
GTCGAGACAT TACGCGTGCA TCGGCAGCAG ATCAGCGCTT TCATGCTCAA GCATGGCCGT
ATCTATCCCC GCAAGAAGGG CTGGACGATG CGCTACCTGC GCTGGCTGCA GGAACAGAAG
TTTGAACATC CCGCCCATCA GATCGCTCTC CAGGAAATGG TTGAGGCGGT CCGCATCTCG
AAAGAACGAG TGGAAAGACT GGAAAGGGTG ATCGAGGAGT TTGTGCCCGA GTGGTCTCTC
GCGCCGGTCG TCCGGGCGTT GCAGACATTG CGCGGCGTAG ATCTGATCGT CGCCGTGACA
TTCACCACCG AAGTCGGCGA TGTACGTCGG TTTGAGAGCC CTCGTCAATT AATGGGCTAT
CTCGGTCTCG TTCCCGGAGA ACGATCAACC GGAGAGACAG TCAGACAGAG CGGCATTACC
AAGGCCGGAA ACGGCCGCGT TCGGCACATG CTTGTCGAAA GTGCATGGAC CTATCGGCAT
CCGCCCCGCG TCGGCAAGGT GAAACTTTAC CGGCTTGAGC AAGCGCCGCA AGCGGTGCGC
GAGATCGCAT GGAAAGCGCA GAGCCGATTG ACCGCACGTT ACCGGATGTT GATCGGACGG
GGCAAGCGGA CGACGGTAGT CTGCACGGCG ATCGCTCGCG AATTGGTCGG CTTCATGTGG
GCCGTTGCAA GGGAGGCGCA GCCGAGGTTG CAATAG
|
|---|
| Protein sequence | MQDYREAFVG IDVAKLKNAV AVADGGRNGE IRYFGEVESS DASMRRAIQR IASRFDHVYF
CYEAGPTGYG LYRLIRSLGY DCLVVAPSLI PRKPGDRVKT NRRDSLSLAR LLRAGELTAV
WVPDEGHEAM RDLVRARAAA VETLRVHRQQ ISAFMLKHGR IYPRKKGWTM RYLRWLQEQK
FEHPAHQIAL QEMVEAVRIS KERVERLERV IEEFVPEWSL APVVRALQTL RGVDLIVAVT
FTTEVGDVRR FESPRQLMGY LGLVPGERST GETVRQSGIT KAGNGRVRHM LVESAWTYRH
PPRVGKVKLY RLEQAPQAVR EIAWKAQSRL TARYRMLIGR GKRTTVVCTA IARELVGFMW
AVAREAQPRL Q
|
|---|
| |