| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Nham_2254 |
|---|
| Symbol | |
|---|
| ID | 4033177 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Nitrobacter hamburgensis X14 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007964 |
|---|
| Strand | - |
|---|
| Start bp | 2506045 |
|---|
| End bp | 2506815 |
|---|
| Gene Length | 771 bp |
|---|
| Protein Length | 256 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 637970714 |
|---|
| Product | pyridoxine 5'-phosphate synthase |
|---|
| Protein accession | YP_577506 |
|---|
| Protein GI | 92117777 |
|---|
| COG category | [H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG0854] Pyridoxal phosphate biosynthesis protein |
|---|
| TIGRFAM ID | [TIGR00559] pyridoxine 5'-phosphate synthase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 0.339029 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTTGAATT CTCCTTCCAT ACGCCTCGGA GTTAATGTTG ATCACGTCGC CACTGTGCGC
AACGCGCGCG GCGGCGATCG GCCGGATGTG GTGCGGATCG CGCTAGCGGC GATCGCGGCC
GGCGCCGACG GCATCACCGC GCATCTGCGC GAGGATCGGC GCCATATTCG CGATACCGAC
ATGGCGCGGC TGAAGGCTGA AATTGCAAAA CCTCTCAATT TCGAGATGGC GGCGACGGCC
GAGATGCAAC GGATCGCGCT GGCCACCAAA CCGCATGCGG TTTGTCTGGT CCCGGAGCGG
CGGGAGGAGC TCACCACCGA AGGCGGCCTC GATGTGGTCG GCCAATACAA TGCGCTGGCG
CCTTTCATCG CGAAACTGAA CGATGCCGGT ATCCGGGTCT CACTGTTCAT TTCCGCCGAT
GCCCGCCAGA TCGAGATGGC GACGAAACTG CGTGCGCCGG CGATCGAGAT TCACACCGGC
GGCTGGTGCG ATGCCGTCGT CGATGGTCAC AGGGAGAAGG CGGACCTCGA ATGGCGCCGT
ATTGTCGAAG GCGTCGCGCT GGCCAGGTCG GCTGGCCTTG AGGTTCACGC CGGGCATGGA
CTCGATTATG ACACGGCGGA AACGATCGCG GCGCTGCCTG AGATCGCTGA GCTCAACATC
GGTTACTTCA TGATCGGCGA GGCGTTGCTC GTCGGGATCG CCGAGACCGT TCGCACCATG
CGCGCTGCCA TGGATCGCGG ACGCGCCATC CTGAAGACGC GTATGGCATG A
|
|---|
| Protein sequence | MLNSPSIRLG VNVDHVATVR NARGGDRPDV VRIALAAIAA GADGITAHLR EDRRHIRDTD
MARLKAEIAK PLNFEMAATA EMQRIALATK PHAVCLVPER REELTTEGGL DVVGQYNALA
PFIAKLNDAG IRVSLFISAD ARQIEMATKL RAPAIEIHTG GWCDAVVDGH REKADLEWRR
IVEGVALARS AGLEVHAGHG LDYDTAETIA ALPEIAELNI GYFMIGEALL VGIAETVRTM
RAAMDRGRAI LKTRMA
|
|---|
| |