Gene Nham_2253 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNham_2253 
SymbolacpS 
ID4033176 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrobacter hamburgensis X14 
KingdomBacteria 
Replicon accessionNC_007964 
Strand- 
Start bp2505629 
End bp2506048 
Gene Length420 bp 
Protein Length139 aa 
Translation table11 
GC content65% 
IMG OID637970713 
Product4'-phosphopantetheinyl transferase 
Protein accessionYP_577505 
Protein GI92117776 
COG category[I] Lipid transport and metabolism 
COG ID[COG0736] Phosphopantetheinyl transferase (holo-ACP synthase) 
TIGRFAM ID[TIGR00516] holo-[acyl-carrier-protein] synthase
[TIGR00556] phosphopantethiene--protein transferase domain 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.154355 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATCATCG GCGTCGGCTC CGACCTGATC GATATCCGCC GGGTGGCGAA GGTCATCGAG 
CGTCACGGCG ACCGGTTCCT CAATCGCATC TTCACGGACG CCGAGCGGGC GAAGGCCGCG 
CGCCGCGCCA ACAACGAGAA GATGGCGGTG GCGACCTACG CAAAGCGGTT TGCCGCGAAG 
GAAGCCTGCT CCAAGGCTCT CGGGACCGGA ATCCGGCATG GCGTGTGGTG GCGGGACATG 
GGCGTCGTCA ATATGCCGTC CGGGCGGCCC TCCATGATCC TCACGGGCGG GGCGCTGAGG 
CGGCTGCAAA TGCTGACGCC GCAGGGTCTT GAGGTGCGGA TAGACCTGAG CCTCACCGAC 
GATTGGCCAC TGGCGCAGGC CTTTGTCATA ATTTCGGCCG TCACACCGGG CAACCTTTGA
 
Protein sequence
MIIGVGSDLI DIRRVAKVIE RHGDRFLNRI FTDAERAKAA RRANNEKMAV ATYAKRFAAK 
EACSKALGTG IRHGVWWRDM GVVNMPSGRP SMILTGGALR RLQMLTPQGL EVRIDLSLTD 
DWPLAQAFVI ISAVTPGNL