Gene Nham_2238 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNham_2238 
Symbol 
ID4030030 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrobacter hamburgensis X14 
KingdomBacteria 
Replicon accessionNC_007964 
Strand
Start bp2491199 
End bp2491711 
Gene Length513 bp 
Protein Length170 aa 
Translation table11 
GC content60% 
IMG OID637970698 
ProductMarR family transcriptional regulator 
Protein accessionYP_577490 
Protein GI92117761 
COG category[K] Transcription 
COG ID[COG1846] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.256726 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAGCCG TTGCGAAGGC TCACGAGCCC GCGGAACAGG TTGTCGGCCA GGCGCCGGTG 
CAGCCGCTCT ATCTCGAAGC GTTGACCCTG GTCGAGCGTC TGCATCGTCG CTTGCTCGAT
GTCATCAAGG ATGAATTCGA TCGTCGCGGT CGCGCCGACA TCAATTCGGT GCAGGCGCTT
CTGCTCTACA ACATCGGCGA CAAGGAGTTG ACCGCCGGCG AACTGCGGAC CCGCGGCTAT
TATCTCGGCT CCAACGTTTC CTACAATCTG AAGAAGCTCG TCGAGTTGGG CTTCCTCGAT
CATCAGCGCT CGCGCGTCGA TCGCCGCTCG GTGCGCATCC GCCTGACCGC GCAAGGTCAG
GAAATCCGCC GCATCGTCGA CGCGCTATAC CAGAAGCACG TCAAGACCGT CGAACAGGTC
GGCGGCATTT CGAACGAGGA GTTCGCAACG CTGAACAAGT CGCTGCATCG CCTCGAGCGT
TTCTGGACCG ATCAGATTCT GTATCGGCTC TGA
 
Protein sequence
MKAVAKAHEP AEQVVGQAPV QPLYLEALTL VERLHRRLLD VIKDEFDRRG RADINSVQAL 
LLYNIGDKEL TAGELRTRGY YLGSNVSYNL KKLVELGFLD HQRSRVDRRS VRIRLTAQGQ
EIRRIVDALY QKHVKTVEQV GGISNEEFAT LNKSLHRLER FWTDQILYRL