Gene Nham_2235 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNham_2235 
Symbol 
ID4030027 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrobacter hamburgensis X14 
KingdomBacteria 
Replicon accessionNC_007964 
Strand
Start bp2488450 
End bp2489637 
Gene Length1188 bp 
Protein Length395 aa 
Translation table11 
GC content61% 
IMG OID637970695 
Producthypothetical protein 
Protein accessionYP_577487 
Protein GI92117758 
COG category[R] General function prediction only 
COG ID[COG0628] Predicted permease 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.55122 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGACCGACT TCACCGCAGG CAAAGGGCAA ACCCGGACGG ATCTGGCATG GGCGATTGCG 
ACCGGAGGGA TCGGCATCGT CCTGTTCGCG GCCCTGCTGG TGTTCGCCTG GGAATTTGCA
GCGACGCTTT TCCTGATCTT CGCCGGTGTG CTGCTCGGTG TCGCTCTCAA CGCCATCACA
AATCTGCTCG GCCGGGTCGT CCGCCTGCCT CATGGATTGC GGCTGACGAT CGTCTGTCTG
GCGCTCGCTG CGGCGTTGTC AGGCGTCGTG GTTCTCGGGG GAACAACAAT CGCGGACCAG
ACAACGGTTT TAAGCAATAC CCTCAAATCG CAGCTTGTGA ACCTCAAGGC CTTCCTCGAG
AAAAATGGCG TAGACACCAG CTACTTCAAT CTGACCAATC TCAATGCATC GTCCGAAACC
TCGAAAGCTT CCGGGACTGC AAGAGCTTCA GGACCCGCAA GAGCCTCCGG AGCCGCAAAA
GCCGAAGAGA CGCCGTCAAC AAATGTTCAG CACAACTTGC CAAGCGCCGG CGCGCTGGCC
TCTAGCGGTT CCGCAATTGT CAGCCAGACC CTGAAGCTCA TCCTCGGCAC CGTCAGCGCC
GTCGGAAATT TCTTCATCGT GCTGTTCCTT GGTCTCTGCT TTGCCGCGCA GCCAACTCTC
TATCGTAAAG GCTTGCTCGG CATGGCGCCC GCGAAACACC GTGCGGCGGC GACGATTCTG
GTCGACAGGA TCGGCGACAC CCTGGAGCGC TGGCTGATCG CCCAGATGGT CACCATGGCC
GCGGTGTTTC TGGTGACCTG GATCGGCCTC GAGATCATCG GTATCCAGAG CTCCTTCATC
CTGGGCATCC AGGCCGGTTT GCTCGCCTTC ATTCCGACCA TCGGCGCGCT GCTCGGCGGG
TTGATCGTCG TGCTGGCGAG TCTGGCGTCG GGATGGGTGG CAGGCGCGAG CGCATTCGTG
CTGTTTCTCG GCGTCCATGC ACTCGAGAGC TACATCCTCA CGCCCATCAT CCAGCGTCAG
GCGCTCGACA TCCCGCCCGC GACGCTGTTC GCGTTCCAGA TATTGCTCGG CGTTGTCTTC
GGCGTATGGG GGCTGGCGCT TGCCCTGCCC CTGCTCGCGA TCGGCAAGGT CGCCATCGAT
TATTTGCGCG AGGATGGCGA GCAGCGGTCC ATCAAAGCCG CAAGTTAG
 
Protein sequence
MTDFTAGKGQ TRTDLAWAIA TGGIGIVLFA ALLVFAWEFA ATLFLIFAGV LLGVALNAIT 
NLLGRVVRLP HGLRLTIVCL ALAAALSGVV VLGGTTIADQ TTVLSNTLKS QLVNLKAFLE
KNGVDTSYFN LTNLNASSET SKASGTARAS GPARASGAAK AEETPSTNVQ HNLPSAGALA
SSGSAIVSQT LKLILGTVSA VGNFFIVLFL GLCFAAQPTL YRKGLLGMAP AKHRAAATIL
VDRIGDTLER WLIAQMVTMA AVFLVTWIGL EIIGIQSSFI LGIQAGLLAF IPTIGALLGG
LIVVLASLAS GWVAGASAFV LFLGVHALES YILTPIIQRQ ALDIPPATLF AFQILLGVVF
GVWGLALALP LLAIGKVAID YLREDGEQRS IKAAS