Gene Nham_2118 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNham_2118 
Symbol 
ID4031948 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrobacter hamburgensis X14 
KingdomBacteria 
Replicon accessionNC_007964 
Strand
Start bp2362510 
End bp2363580 
Gene Length1071 bp 
Protein Length356 aa 
Translation table11 
GC content65% 
IMG OID637970576 
Productphosphoribosylaminoimidazole synthetase 
Protein accessionYP_577375 
Protein GI92117646 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG0150] Phosphoribosylaminoimidazole (AIR) synthetase 
TIGRFAM ID[TIGR00878] phosphoribosylaminoimidazole synthetase 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.957801 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACCGACC GGAAGAACGG CCTTACCTAT GCCGATGCAG GCGTCGATAT CGACGCCGGC 
AACCGGCTGG TTGACCTCAT CAAGCCAATG GTGCGCGCCA CCGCCCGCGC AGGCGCGGAT
GCCGAAATCG GCGGATTCGG CGGACTGTTC GACCTCAAGG CCGCCGGATT CACGGACCCG
GTTCTGGTCG CGGCCAACGA CGGCGTGGGA ACCAAGGTCA AGATTGCGAT CGAAACCGGG
ATACACGACA CCATCGGGAT CGATCTCGTC GCCATGTCCG TCAACGATCT CGTCGTGCAA
GGCGCGGAGC CCCTGTTCTT CCTCGACTAT TTTGCCTGCG GCAAACTCGA TCCCGAGGTT
GCGTCGGCGA TCGTGGCCGG CATCGCGGTC GGTTGCCGGG AGGCGGGTTG CGCCCTGATC
GGCGGCGAAA CGGCCGAAAT GCCGGGCCTC TACAAGGACG GAGACTACGA TCTGGCGGGC
TTCGCAGTCG GCGCGGCCGA ACGCGGCACC TTGCTGCCCG GCCGCGATAT CGCCGCCGGC
GATGCGGTGA TCGGGCTCGC TTCGTCCGGC GTCCATTCCA ACGGCTATTC GCTGGTCCGG
AAGATCGTCG AGGCTTCGGG GCTGGGCTTC AGCGTCCCTG CCCCATTTGC ACCGGTCACC
ACGCTGGGCG GCGCGCTGCT GACGCCGACC CGGCTCTACG TCAAATCCTG CCTGCGCGCG
ATCCGCGAAA CCGGCGCGGT GAAGGGGCTT GCTCACATCA CCGGCGGCGG CTTCACCGAC
AACATTCCCC GCGTGCTGCC CAAACATCTC GGCATCCGCA TCGATCTCTC CAGGTTGACG
GTGCTGCCTG TGTTCAAATG GTTGGCGAGG CAAGGCGGCA TCGCCGAATT GGAATTGCTG
CGAACCTTCA ACTGCGGCGT CGGAATGATC GCGATCGTGC GGCGCGACGC GGTCGAGCAG
GTCGTGGACG TGCTGACGCA GGCCGGCGAA AGAGTCGCGC CGCTCGGTAG CGTTATCGAG
GCCAGCGGCG ACCGCGTCGT TTACGACAAC CACCTCGATC TCGCGATGTA A
 
Protein sequence
MTDRKNGLTY ADAGVDIDAG NRLVDLIKPM VRATARAGAD AEIGGFGGLF DLKAAGFTDP 
VLVAANDGVG TKVKIAIETG IHDTIGIDLV AMSVNDLVVQ GAEPLFFLDY FACGKLDPEV
ASAIVAGIAV GCREAGCALI GGETAEMPGL YKDGDYDLAG FAVGAAERGT LLPGRDIAAG
DAVIGLASSG VHSNGYSLVR KIVEASGLGF SVPAPFAPVT TLGGALLTPT RLYVKSCLRA
IRETGAVKGL AHITGGGFTD NIPRVLPKHL GIRIDLSRLT VLPVFKWLAR QGGIAELELL
RTFNCGVGMI AIVRRDAVEQ VVDVLTQAGE RVAPLGSVIE ASGDRVVYDN HLDLAM