| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Nham_2116 |
|---|
| Symbol | |
|---|
| ID | 4031946 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Nitrobacter hamburgensis X14 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007964 |
|---|
| Strand | - |
|---|
| Start bp | 2361063 |
|---|
| End bp | 2361743 |
|---|
| Gene Length | 681 bp |
|---|
| Protein Length | 226 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 637970574 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_577373 |
|---|
| Protein GI | 92117644 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG0593] ATPase involved in DNA replication initiation |
|---|
| TIGRFAM ID | [TIGR03420] DnaA regulatory inactivator Hda |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 0.178946 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGGCAGGCC GCCCCCGACC CCGTCAGCTT GCATTCGTGC TGCCGCACGC GGAAAGCCTT
TCGCGGGACG ATTTTCTCGA AGGTCCCGCG AACGCGGCGG CGCTGTCGCT GATCGAGAGT
TGGCCGGAAT GGCCGAACCG GGTCATGCTG CTTGCCGGCC CTGAAGGTTG CGGCAAGAGC
CATCTGGCGA CGATCTGGGC GGAGCAGGCG GGCGCGCGTT CCATAAGCGC GCACGGCCTG
ACTGCGGCGG CGGTGCCGGG AGCGCTGGCG ACAGGGGCGC TCGTCGTTGA GGATATCAAT
CCGCATGCCT TCGACGAGCT TGCGCTGTTT CACCTGATGA ATCTCGCCCG CGAGGACGGC
GCGTTCGTGC TGATGACGGC GCGGGTGCCT CCGGCCGCCA TCGAGATCGG GTTGCGCGAC
CTTCAGTCGC GGCTTCGCGC GGTGCCCGTC GTAACGCTGA TGCCGCCCGA CGATCAGTTG
CTCCGGGCGC TGATTATCAA GTTCTGCGCG GACCGCCAGA TGAGCATCGA CGAGACGGTT
GTCCATTTTA TCGCAACGCG GACCGAGCGC TCGTTTGCTG CCGCCCGCCA CGCCATCGAA
CGGCTCGATG CCGAATCGCT GCGGCTTGGC AGGCCGGTGA CGCGCGCGCT TGCCGCCGAA
TTGCTGCGGA ATCACGACTG A
|
|---|
| Protein sequence | MAGRPRPRQL AFVLPHAESL SRDDFLEGPA NAAALSLIES WPEWPNRVML LAGPEGCGKS
HLATIWAEQA GARSISAHGL TAAAVPGALA TGALVVEDIN PHAFDELALF HLMNLAREDG
AFVLMTARVP PAAIEIGLRD LQSRLRAVPV VTLMPPDDQL LRALIIKFCA DRQMSIDETV
VHFIATRTER SFAAARHAIE RLDAESLRLG RPVTRALAAE LLRNHD
|
|---|
| |