| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Nham_2066 |
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| Symbol | |
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| ID | 4031240 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nitrobacter hamburgensis X14 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007964 |
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| Strand | - |
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| Start bp | 2295635 |
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| End bp | 2297119 |
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| Gene Length | 1485 bp |
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| Protein Length | 494 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 637970523 |
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| Product | RND efflux system, outer membrane lipoprotein, NodT |
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| Protein accession | YP_577323 |
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| Protein GI | 92117594 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1538] Outer membrane protein |
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| TIGRFAM ID | [TIGR01845] efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGGGTGATT CTCCTGCGAA GGCCTTGAGC GGTTTACAAG GGGTTGCGAG GTGGATTCAT
CGCTCCGCCA TGCTTCTCCC TATGTTGGCG ATGGTGGCAA CGTCGGCTGG CTGCATCCTG
ACCAGGGATC TTCCCGATCC GGCGCTGGAC ATTCCGGCCG GGTACAAGGC CGCGCGGCTG
ACCACGACTG AGGCTCCGCC GACGCTCGAC TGGTGGCGTG GCTTTCGCTC GCCCGAACTG
ACGGACCTGA TGGAGGAAGC TCAGACCGTC AATCTGGACA TTGCAGCGGC GACGGCGCGG
ATCATTCAGG CCGATCAGCA AGCCCGGATC GCGGGGGCGG CGCTGTTGCC GAGCGTCAGT
GTCGGGGGGC AGGAAACCTA TTCCCGCACG TCGGGCTCGA GTTCCAGCGG CCTGACCAAC
CGCGGTCGGG AAGTTGTGAA CTACTCGTCG TCGCTGAGCG CCGCCAGCTA TGAGATCGAT
TTCTGGGGCA AGAACCGCGA TGCAACACTG GCCGCAGAGG AAACCGCGAC CGCGAGCCGC
TTTGATCGCG ACGTGGTGGG CCTGACGACT CTCACCAGCG TTGCGAATGC CTATTTCCAG
GTTCTCGCAG CGCAAGACCG TATTCGTACC GCCGAGCGCA ACATCGCCAG CGCCGTGCGC
ATCCTCGACG CGATCAAGCA GCGGCTGAGC GCCGGCACCG GGACCGATCT CGACGTGGCG
CAACAGGAAA GCGTGCTGGC AAATCAGCGC GCCGCCGTTC CGCCGCTTCG TCAGATTTTG
GCGCAGAACA TCAACGCACT CGCGACGCTG GTGGCTCGTC CGCCGGAAAG CGTGAAGGTC
AAGGGCGGCT CGCTCAACCA GATCGCCGCG CCGCGGGTGA CGCCGGGCCT GCCGTCGGAA
TTATTGACAC AGCGTCCGGA CATCCGCCGT CAGGAGGCGC AACTCGCATC GGCTACCGCG
AACGTGGGCA GCGCGCGCGC GCAGTTTTTC CCGAGCATTC AATTGACCGG GCAGGGTGGC
TACCAGAGTT CGGCCCTGGT CGCGCTGTTC CAGCCCCAGG CCGCATTTTT CAGTCTCGCC
GGCGGACTGA CGCAGCCGAT TTTCGACGGC GGCAGGATTC TCGGCAACTT CGAGTACACA
AAAGCGAAAC AGGACGAACT GCTTCAGACG TACCGCAAAA CAGTGGTTTC GGCGTTCGCC
GACGTCGATA ACGCGTTGAT CGCGATCCGT CAGACCACGG AGAGGCTGCG CCTTCAGCGG
AAGGTCGTGA CCGCCTCACG CAGGGCATTC GAACTCGGCG AGCAGCAGCT TCGGGCCGGC
ACAGCCGACA TCGTAACCGT GCTGAATACG CAACTGACGC TGTTTCAGGC GGAGGATTCG
CTGTCGCAGG CACAGCTTGC GCGACTACTG GCAGTCGTGA GCCTTTATCA GGCCCTGGGC
GGCGGCTGGG AACCAAAAAT TGAGAGGCCG GGCAATGCTC TTTAA
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| Protein sequence | MGDSPAKALS GLQGVARWIH RSAMLLPMLA MVATSAGCIL TRDLPDPALD IPAGYKAARL
TTTEAPPTLD WWRGFRSPEL TDLMEEAQTV NLDIAAATAR IIQADQQARI AGAALLPSVS
VGGQETYSRT SGSSSSGLTN RGREVVNYSS SLSAASYEID FWGKNRDATL AAEETATASR
FDRDVVGLTT LTSVANAYFQ VLAAQDRIRT AERNIASAVR ILDAIKQRLS AGTGTDLDVA
QQESVLANQR AAVPPLRQIL AQNINALATL VARPPESVKV KGGSLNQIAA PRVTPGLPSE
LLTQRPDIRR QEAQLASATA NVGSARAQFF PSIQLTGQGG YQSSALVALF QPQAAFFSLA
GGLTQPIFDG GRILGNFEYT KAKQDELLQT YRKTVVSAFA DVDNALIAIR QTTERLRLQR
KVVTASRRAF ELGEQQLRAG TADIVTVLNT QLTLFQAEDS LSQAQLARLL AVVSLYQALG
GGWEPKIERP GNAL
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