| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Nham_1985 |
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| Symbol | |
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| ID | 4029362 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nitrobacter hamburgensis X14 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007964 |
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| Strand | - |
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| Start bp | 2199957 |
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| End bp | 2203307 |
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| Gene Length | 3351 bp |
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| Protein Length | 1116 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 637970443 |
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| Product | type III restriction enzyme, res subunit |
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| Protein accession | YP_577245 |
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| Protein GI | 92117516 |
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| COG category | [K] Transcription
[L] Replication, recombination and repair |
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| COG ID | [COG1061] DNA or RNA helicases of superfamily II |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCTTGAGC TTGGCGAGCC GCACAACGAC GATAGTGAGG CCCCCGATAA GGTCATTCCG
ACCGGCGCGG CACTACACCT GCCCGAAATC GAATATCAGC AGAAACACCG GATAGGCCGG
CGTTTCTGCC TAATCGCCCC TGCCCGCATT GCTACCGTCC ACGAGGTCAC TACGATACCC
GTCTCGGTAC GCAGTAGCGT CGAGCTCTAT CACCTCGGAG ACGGCGACCG CATAGTCGTC
GTCGAAAAGC CGCTGGCGTC GATACCGGAC GGAATAACAG CCGTCCTCGT GCGTAGAACG
GACGGCACCG GCCGGTGGCA ATGGCATAAA AAGCTCGCGG ACTTCGAAGA CAGGATGCAC
TCGAATGCTT CAGCGGTCGC CGCAAGCATC GAAGCGTCGT GGAAAGATTG CTTCCGCTTC
AGGACCGAAG AAGCCGACGC TGACGGGATC GTCGCCCCGG GAAACGAAGG CCTACGTCCT
CCACAAATAG GCGCGCTGCA CTCGATTGGC GCGCATTGGA GCATTTTTCC GAACGAGACC
GCCACGGTGG TCATGCCCAC TGGAACGGGC AAGACAGAAA CAATGCTCTG TACCGTCATC
AACTACCGTA GAGGGCCGAC CCTGGTGGCA GTGCCTTCCA ATGCGCTGCG GGTACAGACG
CTCGGGAAAT TCCGTAGCCT CGGCCTGCTT CGCTTCCTTA AACTCATAGA CGAGGACATC
CACAATCCGA TCGTGAGTGT GATCACCAAG GAGCCGACGA CGGAAGAGGA TCTGGACCTT
ATCCGGGGAG CGAACGTCGT TATTGGAGTC ATGGCCTCGC TCGGGGCCGA CTCTTCCGAG
CCCATGTTCG AAAAGATCGC TGCGCTGGTC GGCTCCCTCT TCGTCGATGA GGCGCATCAT
GTCGCATCGA GGACATGGGC CAACTTCCGC GCGCACTTTC GCCAGCACCA TATTTTGCAG
TTCACCGCCA CGCCCTTCCG GCAGGACGGA AAGTTGGTCG ACGGCCGCGT TATCTTCAAC
TATCCGCTGG CCGCGGCCCA GCGCGACGGA TATTTCAAGC CGATTAGGTT CCTTCCCGTG
AGCGAGATCG ACGAGGAACA ATCGGACCTT GCAATCGCCG AAGAGGCGGT CAAAGCCCTC
AGGAATGATC TCGCTTCCGG ACTTAATCAC CGTCTGATGG CCCGCTGCGC GAAGATACCG
CGAGGAGCAC AGATCAAAGA CATCTACGCC CGCATCGCCC CTGAGATGAA TCCCATCGTC
GTCCATTCTG AGATGACGGA TTCCATCATC TCAGATGCAC TATCGAACGT CAGGGACGCG
ACAAGCCGAA TCGTCATCTG CGTCAATATG CTCGGTGAAG GATTCGACCT GCCCGAGCTC
AAGATCGCCG CGCTTCACGA CCTACATAAA AGCCTGCCCG TCCTGTTGCA ATTCACCGGG
CGCTTCACGC GAAGCTCGGG GCAGCGCATC GGCGATGCAA CGGTGATCGC CAACATCGCG
GATCCACGGG TCTCTACCAA GCTGGAGCGC CTGTACAGTG AGAACGCAGA CTGGAATTCA
ATACTAAGCG AAGAAAGCTC AAAGGCCGCC CGAGAACATG CTGAACTGAT CGAATTCCTG
AAGACCTCAC AATCGCTCGT CGAAGAATCG GACGTCAGTG AGCTCCGAAT TTCGCAAAGT
CTCCTGCGCC CGAAGTTCAG CACCATCGTC TTCCGGTGCC AAGTGTTCTC TCCGAAGCGT
TTTCAGGCCG GCCTCCCTGA GTCGGTGACC GTGCATGCCG CATGGTACAA TCCCGATGCT
AAGCTGGTGT TCTTCGTCTG CCGGAAGGAG GAAAGGGTCC GCTGGAGTCG TGGAAAGAAG
ATCCTCGACC GTCAGTGGAA CCTGTTCGTC CTTTTCCACG ACGAGGAGAA GCGACTGCTT
CACATTAGCT CCTCCGACAA AGACTCCATG CACGATGGCC TAGCGAAGGC TGTGGGAGGT
CAAGAACGCA TCCAAGGAGA GGATGTCTTC AGGTGCCTTG GCGGAATCAA CCGCCTGATA
TTCAGCAATA TTGGTGTCCG GAAGCATGGC CGCCGCAATA TGAGCTTCGC CATGTACACC
GGAGCCGATG TGCAGGACGC ACTGACGATC ACTGAGACAT CCAACGCCAC CAAGTCCAAC
ATGGACGGCC GCGGCTGGGA GAACGGTTCG CTTGTGACGC CCGGCTGCTC GGCGAAAGGA
CGGGTCTGGT CGAAAGCACA AGGGACCATA CCCCAACTCG TGAAATGGGC TGTGCCCGTC
GGCCGCAAGT TGATCGATCC AGCCATAGAC GCGTCGCTGA TCCTGAAGAA CGTGCTCATT
CCAACCGAGG TCAAAGGATC GTTTCCGTCC GAGACCGTCC TTTCGGTCGA GTGGCCTCCC
GAACTCCTGA AACTATCGGA TGAAAAGTTC TTCGTGACGA ATGGCGTCGT CGAAATACCC
GGAACGTTCT GCGAATGGGA ACACGACGAA GAAAACTCGA TGTCGGCAGA GCTCGTGTTC
CGTCTGGTCT CAATCTCCGG CGAAATCGAC GCCGTCGTCA AACTGACGTT CGACGATGCC
GAGGGCTACC GGTTCACCAT CGACAGAACC CTGACCATCA AGGTCGGTCA GCGCGAAGAG
CCGCTGCAGG AGTATCTCGA CGGCTATCCG CTGCTCGTGA GATACGTGGA CCTAAAAGAA
CTTGAGGGCA ATCTCCTCTA TGCGCAGAAC CAACCGCTCG ACATCGATAT CGACGATCGC
TCGTTGATCG GATGGGATTG GCCAGCTTCC CAGGTCGATA TCACGGTGGA GTCGATCTGG
AAAAAAGGCT CCGAACGGCC GCGTTCGGTC CAGGCCTTCG TTGCAGAGTA CTATCGAAAC
GAGGACTTCG AGCTCATTTT CAATGACGAC GACGCCGGTG AAGCCGCCGA TCTGATATGC
CTGAAAGAGA CCGACGAACA TATCCGTCTC GTGCTTGTCC ACTGCAAGTT TTCTGGCGGA
CTCACAGAAG GCAAGCGGGT CAAGGATGTC GTGGAAGTAA GCTCTCAGGC AGTCAGGTCG
GCCGTTTGGC GCGGAAATTT CAACTCGTTG AATCGCCACA TGCTGGCTAG GCAAAAGTTG
ACGGGTTCCG GGAACGTAAA TCGATCCCGC TTCATCGTCG GCAACAACAC CGTTCTGAGC
TCGATCGTAA AGAAAAGCCG GCTGAAGCCA ATCGATTTCC AGGTTGTGAT CGCTCAACCC
GGAGTGAAAC AATCCGATCT AAGCCAAAGT CAGAGGTCGG TTCTTGGCTC CGCTATTTCA
TTTTTGAAAC AGACAGTCGA CGTCGACTTG AAGATCATTT GCAGCAAGTA G
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| Protein sequence | MLELGEPHND DSEAPDKVIP TGAALHLPEI EYQQKHRIGR RFCLIAPARI ATVHEVTTIP
VSVRSSVELY HLGDGDRIVV VEKPLASIPD GITAVLVRRT DGTGRWQWHK KLADFEDRMH
SNASAVAASI EASWKDCFRF RTEEADADGI VAPGNEGLRP PQIGALHSIG AHWSIFPNET
ATVVMPTGTG KTETMLCTVI NYRRGPTLVA VPSNALRVQT LGKFRSLGLL RFLKLIDEDI
HNPIVSVITK EPTTEEDLDL IRGANVVIGV MASLGADSSE PMFEKIAALV GSLFVDEAHH
VASRTWANFR AHFRQHHILQ FTATPFRQDG KLVDGRVIFN YPLAAAQRDG YFKPIRFLPV
SEIDEEQSDL AIAEEAVKAL RNDLASGLNH RLMARCAKIP RGAQIKDIYA RIAPEMNPIV
VHSEMTDSII SDALSNVRDA TSRIVICVNM LGEGFDLPEL KIAALHDLHK SLPVLLQFTG
RFTRSSGQRI GDATVIANIA DPRVSTKLER LYSENADWNS ILSEESSKAA REHAELIEFL
KTSQSLVEES DVSELRISQS LLRPKFSTIV FRCQVFSPKR FQAGLPESVT VHAAWYNPDA
KLVFFVCRKE ERVRWSRGKK ILDRQWNLFV LFHDEEKRLL HISSSDKDSM HDGLAKAVGG
QERIQGEDVF RCLGGINRLI FSNIGVRKHG RRNMSFAMYT GADVQDALTI TETSNATKSN
MDGRGWENGS LVTPGCSAKG RVWSKAQGTI PQLVKWAVPV GRKLIDPAID ASLILKNVLI
PTEVKGSFPS ETVLSVEWPP ELLKLSDEKF FVTNGVVEIP GTFCEWEHDE ENSMSAELVF
RLVSISGEID AVVKLTFDDA EGYRFTIDRT LTIKVGQREE PLQEYLDGYP LLVRYVDLKE
LEGNLLYAQN QPLDIDIDDR SLIGWDWPAS QVDITVESIW KKGSERPRSV QAFVAEYYRN
EDFELIFNDD DAGEAADLIC LKETDEHIRL VLVHCKFSGG LTEGKRVKDV VEVSSQAVRS
AVWRGNFNSL NRHMLARQKL TGSGNVNRSR FIVGNNTVLS SIVKKSRLKP IDFQVVIAQP
GVKQSDLSQS QRSVLGSAIS FLKQTVDVDL KIICSK
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