Gene Nham_1962 details

Gene Information

• Locus tag: Nham_1962
• ID: 4033098
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Nitrobacter hamburgensis X14
• Kingdom: Bacteria
• Replicon accession: NC_007964
• Strand: +
• Start bp: 2177748
• End bp: 2178224
• Gene Length: 477 bp
• Protein Length: 158 aa
• Translation table: 11
• GC content: 59%
• IMG OID: 637970422
• Product: pyridoxamine 5'-phosphate oxidase-related, FMN-binding
• Protein accession: YP_577224
• Protein GI: 92117495
• COG category: [R] General function prediction only
• COG ID: [COG3467] Predicted flavin-nucleotide-binding protein

Plasmid Coverage information

• Num covering plasmid clones: 15
• Plasmid unclonability p-value: 0.181208
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGCAAAAGC TTCTGGATGA GCACCGGGTC ATGACGGTTG CCACGAACCG GCCCGATGGC 
TGGCCGCAGG CGACAACCGT CGGCTACGCA AACGAAGGCT TGACGCTCTA TTTTATGTGC 
GGCCTCAACA GCCAGAAGGC CAACAATCTC GCCCGCGATG ATCGGGTGTC GCTGACCATC 
GACCACGACA CAGATCAGCT GATGGCCATC ACCGGGTTAT CAATGGCAGG GCATGCGCAG 
CCCGTGACCG ATCCGGCGGA CGGAGAGAAG ATTTTGCGTA TTGTGAAATT ACAGCAAGGG 
CTTCGGCCAT ACCGACCTCG TCACCTACGG GGCGAATGCG TGATCCAATC TGTGCGCGCT 
ATGAATGTAA CCTCGGTCGC GATTTCGGCC AGATGCAATC ACCCGCACCG CGCCTGTCGG 
ACCGATCACG TGCTACGCGG TGCGGGCGGG AAAGTACGAG TTTGGCCGCT GAGATAG 

 

Protein sequence

MQKLLDEHRV MTVATNRPDG WPQATTVGYA NEGLTLYFMC GLNSQKANNL ARDDRVSLTI 
DHDTDQLMAI TGLSMAGHAQ PVTDPADGEK ILRIVKLQQG LRPYRPRHLR GECVIQSVRA 
MNVTSVAISA RCNHPHRACR TDHVLRGAGG KVRVWPLR