36 homologs were found in PanDaTox collection
for query gene Nham_1962 on replicon NC_007964
Organism: Nitrobacter hamburgensis X14



Page 1 of 1    << first  < prev  1  next >  last >>   


Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score

E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_007964  Nham_1962  pyridoxamine 5'-phosphate oxidase-related, FMN-binding  100 
 
 		 158 aa  328  1e-89  Nitrobacter hamburgensis X14  Bacteria  normal  0.181208  n/a   
 
 
-
 
NC_010622  Bphy_2360  pyridoxamine 5'-phosphate oxidase-related FMN-binding  75 
 
 		 150 aa  157  6e-38  Burkholderia phymatum STM815  Bacteria  normal  1  normal  0.233006 
 
 
-
 
NC_008781  Pnap_4000  pyridoxamine 5'-phosphate oxidase-related, FMN-binding  62.7 
 
 		 150 aa  155  2e-37  Polaromonas naphthalenivorans CJ2  Bacteria  normal  0.166717  normal  1 
 
 
-
 
NC_007908  Rfer_2436  pyridoxamine 5'-phosphate oxidase-related, FMN-binding  75.79 
 
 		 150 aa  152  1e-36  Rhodoferax ferrireducens T118  Bacteria  decreased coverage  0.000271809  n/a   
 
 
-
 
NC_007404  Tbd_0006  hypothetical protein  61.11 
 
 		 151 aa  148  2e-35  Thiobacillus denitrificans ATCC 25259  Bacteria  normal  1  normal  1 
 
 
-
 
NC_013889  TK90_2082  pyridoxamine 5'-phosphate oxidase-related FMN-binding protein  67.37 
 
 		 155 aa  144  7.0000000000000006e-34  Thioalkalivibrio sp. K90mix  Bacteria  normal  0.510158  normal  1 
 
 
-
 
NC_011901  Tgr7_1947  pyridoxamine 5'-phosphate oxidase-related FMN-binding  54.05 
 
 		 155 aa  143  1e-33  Thioalkalivibrio sp. HL-EbGR7  Bacteria  hitchhiker  0.000031905  n/a   
 
 
-
 
NC_007348  Reut_B5702  pyridoxamine 5'-phosphate oxidase-related, FMN-binding  55.91 
 
 		 150 aa  141  4e-33  Ralstonia eutropha JMP134  Bacteria  normal  0.884169  n/a   
 
 
-
 
NC_010338  Caul_3763  pyridoxamine 5'-phosphate oxidase-related FMN-binding  49.48 
 
 		 166 aa  89.7  1e-17  Caulobacter sp. K31  Bacteria  normal  1  normal  1 
 
 
-
 
NC_010338  Caul_2456  pyridoxamine 5'-phosphate oxidase-related FMN-binding  51.76 
 
 		 171 aa  85.1  3e-16  Caulobacter sp. K31  Bacteria  normal  0.502325  normal  0.600278 
 
 
-
 
NC_010338  Caul_0850  pyridoxamine 5'-phosphate oxidase-related FMN-binding  43.01 
 
 		 155 aa  75.1  0.0000000000004  Caulobacter sp. K31  Bacteria  normal  0.119424  normal  0.155123 
 
 
-
 
NC_007955  Mbur_1693  pyridoxamine 5'-phosphate oxidase-related, FMN-binding  32.63 
 
 		 148 aa  66.2  0.0000000002  Methanococcoides burtonii DSM 6242  Archaea  hitchhiker  0.00000026689  n/a   
 
 
-
 
NC_007355  Mbar_A3000  hypothetical protein  30.53 
 
 		 146 aa  57.4  0.00000007  Methanosarcina barkeri str. Fusaro  Archaea  normal  0.225555  decreased coverage  0.000458503 
 
 
-
 
NC_013739  Cwoe_5786  pyridoxamine 5'-phosphate oxidase-related FMN- binding protein  41.67 
 
 		 155 aa  57  0.0000001  Conexibacter woesei DSM 14684  Bacteria  normal  1  normal  0.313411 
 
 
-
 
NC_007517  Gmet_2113  pyridoxamine 5'-phosphate oxidase-related, FMN-binding protein  36.67 
 
 		 158 aa  53.5  0.000001  Geobacter metallireducens GS-15  Bacteria  normal  1  normal  1 
 
 
-
 
NC_013165  Shel_20760  predicted flavin-nucleotide-binding protein  26.52 
 
 		 167 aa  50.1  0.00001  Slackia heliotrinireducens DSM 20476  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009565  TBFG_13006  hypothetical protein  36.59 
 
 		 163 aa  48.5  0.00004  Mycobacterium tuberculosis F11  Bacteria  normal  0.0109972  normal  1 
 
 
-
 
NC_007333  Tfu_2318  hypothetical protein  27.64 
 
 		 133 aa  44.7  0.0005  Thermobifida fusca YX  Bacteria  normal  0.238988  n/a   
 
 
-
 
NC_012669  Bcav_4137  pyridoxamine 5'-phosphate oxidase-related protein FMN-binding  39.66 
 
 		 172 aa  43.5  0.001  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.428154  normal  1 
 
 
-
 
NC_002939  GSU2998  nitroimidazole resistance protein, putative  23.93 
 
 		 180 aa  43.1  0.002  Geobacter sulfurreducens PCA  Bacteria  normal  1  n/a   
 
 
-
 
NC_009338  Mflv_0791  pyridoxamine 5'-phosphate oxidase-related, FMN-binding  30.59 
 
 		 165 aa  42.7  0.002  Mycobacterium gilvum PYR-GCK  Bacteria  normal  1  normal  1 
 
 
-
 
NC_013595  Sros_3594  pyridoxamine 5'-phosphate oxidase-related FMN- binding protein  39.66 
 
 		 132 aa  43.1  0.002  Streptosporangium roseum DSM 43021  Bacteria  normal  0.0641507  normal  1 
 
 
-
 
NC_008726  Mvan_0059  pyridoxamine 5'-phosphate oxidase-related, FMN-binding  30.85 
 
 		 165 aa  42.4  0.002  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  1  normal  0.291977 
 
 
-
 
NC_013131  Caci_6484  pyridoxamine 5'-phosphate oxidase-related FMN- binding  35.71 
 
 		 122 aa  42  0.003  Catenulispora acidiphila DSM 44928  Bacteria  normal  1  normal  1 
 
 
-
 
NC_008146  Mmcs_0051  pyridoxamine 5'-phosphate oxidase-related, FMN-binding protein  31.91 
 
 		 169 aa  42  0.003  Mycobacterium sp. MCS  Bacteria  normal  0.158303  n/a   
 
 
-
 
NC_013131  Caci_6087  pyridoxamine 5'-phosphate oxidase-related FMN- binding  35.14 
 
 		 129 aa  42  0.003  Catenulispora acidiphila DSM 44928  Bacteria  normal  1  normal  0.116644 
 
 
-
 
NC_008705  Mkms_0060  pyridoxamine 5'-phosphate oxidase-related, FMN-binding  31.91 
 
 		 169 aa  42  0.003  Mycobacterium sp. KMS  Bacteria  normal  1  normal  0.0501649 
 
 
-
 
NC_009077  Mjls_0041  pyridoxamine 5'-phosphate oxidase-related, FMN-binding  31.91 
 
 		 169 aa  42  0.003  Mycobacterium sp. JLS  Bacteria  normal  0.299884  normal  0.0534302 
 
 
-
 
NC_013131  Caci_7774  pyridoxamine 5'-phosphate oxidase-related FMN- binding  33.75 
 
 		 129 aa  41.6  0.004  Catenulispora acidiphila DSM 44928  Bacteria  normal  1  normal  1 
 
 
-
 
NC_013595  Sros_2725  hypothetical protein  34.94 
 
 		 172 aa  42  0.004  Streptosporangium roseum DSM 43021  Bacteria  normal  0.381654  normal  1 
 
 
-
 
NC_008148  Rxyl_1056  pyridoxamine 5'-phosphate oxidase-related, FMN-binding protein  30.4 
 
 		 135 aa  40.8  0.007  Rubrobacter xylanophilus DSM 9941  Bacteria  normal  0.991641  n/a   
 
 
-
 
NC_009767  Rcas_2741  pyridoxamine 5'-phosphate oxidase-related FMN-binding  32.94 
 
 		 125 aa  40.8  0.008  Roseiflexus castenholzii DSM 13941  Bacteria  normal  1  normal  1 
 
 
-
 
NC_013132  Cpin_0886  pyridoxamine 5'-phosphate oxidase  38.98 
 
 		 214 aa  40.8  0.008  Chitinophaga pinensis DSM 2588  Bacteria  normal  1  normal  1 
 
 
-
 
NC_008726  Mvan_5116  pyridoxamine 5'-phosphate oxidase-related, FMN-binding  41.03 
 
 		 170 aa  40.4  0.01  Mycobacterium vanbaalenii PYR-1  Bacteria  decreased coverage  0.00582982  normal  0.597944 
 
 
-
 
NC_013595  Sros_8501  hypothetical protein  28 
 
 		 137 aa  40.4  0.01  Streptosporangium roseum DSM 43021  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009921  Franean1_0582  pyridoxamine 5'-phosphate oxidase-related FMN-binding  34.43 
 
 		 150 aa  40.4  0.01  Frankia sp. EAN1pec  Bacteria  normal  1  normal  1 
 
 
-
 
Page 1 of 1    << first  < prev  1  next >  last >>