Gene Nham_1897 details

Gene Information

• Locus tag: Nham_1897
• ID: 4033035
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Nitrobacter hamburgensis X14
• Kingdom: Bacteria
• Replicon accession: NC_007964
• Strand: +
• Start bp: 2111828
• End bp: 2112523
• Gene Length: 696 bp
• Protein Length: 231 aa
• Translation table: 11
• GC content: 56%
• IMG OID: 637970363
• Product: signal-transduction protein
• Protein accession: YP_577165
• Protein GI: 92117436
• COG category: [T] Signal transduction mechanisms
• COG ID: [COG2905] Predicted signal-transduction protein containing cAMP-binding and CBS domains

Plasmid Coverage information

• Num covering plasmid clones: 24
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGATAGTTG GGCTGCCCAT GAAGGCTTCC GAAGTGATGC GATCGCCGGC GGTGAGTGTC 
GCGCCGGATT GTCGCGTGAT TGATGCGGTT CGGCTTCTGA TGGAAACCAA TCGGAGAGGG 
TTACCGGTTG TCGACAGTTC CGGCATTCTC GTCCGGATCG TGTCGGAAGG TGACTTTCTG 
CGTCGCGTTG AACTTGGAAC AGTGCCAACA GATCGGCCAT GGTTCGACGC ATTTTTTGGA 
GCAGGAGAAA GCGCCACGGC CTTTGCGCGT GCGTATGGCC GCAGCGTCGA TGAGATTATG 
ACGCAAGACC CGGTATGCGT GGCACCGGAT GCGGATTTAA CCGAAGCGAT TGCCTTGATG 
GAGAGCCGTC ACGTTGCGCA GATTCCAGTC GTCTTTGAAG GTGCTGTCCT TGGAATGATC 
TCGAAGACCG AACTCCTTGC AGCGGTGGAA CGCAAGTTCG ATCAGAGCGA CCACGCCGGG 
CAGGATGTTC GCGACAACAT CCTCGCTGCG ATTCGGAAAG AAAGCTGGGC GGCAGGAGCT 
ATCGTTGACG TCGTTGTGAC GAGCGGGGAA ATCCAGATGT GGGGTGTGAT TGTCGACCAT 
AATCAACGCA AGGCCCTGAA GGCGCTCATT GAGAATGTTG CCGGGGTCGA GCGGATCGCG 
GATCATCTAA AACTTAGAGA TGAGTTGCCG CTTTGA 

 

Protein sequence

MIVGLPMKAS EVMRSPAVSV APDCRVIDAV RLLMETNRRG LPVVDSSGIL VRIVSEGDFL 
RRVELGTVPT DRPWFDAFFG AGESATAFAR AYGRSVDEIM TQDPVCVAPD ADLTEAIALM 
ESRHVAQIPV VFEGAVLGMI SKTELLAAVE RKFDQSDHAG QDVRDNILAA IRKESWAAGA 
IVDVVVTSGE IQMWGVIVDH NQRKALKALI ENVAGVERIA DHLKLRDELP L