| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Nham_1875 |
|---|
| Symbol | |
|---|
| ID | 4029579 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Nitrobacter hamburgensis X14 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007964 |
|---|
| Strand | + |
|---|
| Start bp | 2085490 |
|---|
| End bp | 2086617 |
|---|
| Gene Length | 1128 bp |
|---|
| Protein Length | 375 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 61% |
|---|
| IMG OID | 637970344 |
|---|
| Product | Cys/Met metabolism pyridoxal-phosphate-dependent enzymes |
|---|
| Protein accession | YP_577146 |
|---|
| Protein GI | 92117417 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0626] Cystathionine beta-lyases/cystathionine gamma-synthases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 0.281011 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGAAGCCGT TTCCGTCGAA GACCCATATC GGCAATCACA TGCTGCATCC CGAAACGCTG
ATGCTGAACT ATGGCTACGA TCCTCAACTG TCGGAGGGCG CCGTCAAGCC GCCCGTATTC
CTGACATCGA CCTTCGTTTT CAGGACCGCC GAGGATGGGC AGGACTACTT CGATTTCGTG
TCGGGTCGGC GCGAGCCGCC TGAGGGGCAG GGCGCGGGAC TGGTTTACTC ACGCTTCAAT
CACCCGAACA GCGAGATCGT CGAGGACCGG TTCTCCGTCT ACGAGCGCAC TGATAAATGC
GCGCTGTTCT CGTCTGGCAT GTCGGCGATC GCGACCACGA TTCTCGCCTT CGTCCGTCCG
GGCGACGTAA TCCTGCATTC CCAGCCGCTT TATGGCGGGA CCGAGACCCT CTTCGCCAAG
ACGCTTGCGG GTCTTTCCAT CAACGCGGTC GGCTTCGCGG ACGGCGTCGA CGAAGCCGCG
GTCAGCGCGG TAGCGCAGGA CGCCACGCGC AAAGGGCGGG TGGCGATGAT CTTCACTGAA
ACCCCGGCGA ATCCAACGAA CAGTCTGGTC GACATCGCGA TGGTGCGCCG CATCGCCGAC
ACGATCGGCC GGGCTCAGGG CCATACACCG CTCGTCGTAT GCGACAACAC GCTGCTCGAC
GTGAAGGCGC TGCGAGGCGC CATCGGCACC CAACTGGATC CGCATTCCTG CTGGATTCTC
AGCCGGTCGC TCGAGACATT GAGCATCCGC GTGGAAAAAG CGGATGCCAA CGCGCGGATC
GTCGCGGACT GCCTGCTGGA TCACGCCAAA GTGGCTAAGG TCCACTACCT TGGGCACCTC
GACGAATATT CTCCGGCCGG CCACGTGTTC AAGAGGCAAT GCACCGGCGC GGGCTCTACG
TTTTCATTCG ACATTGTCGG TGGTCAGGCT GCGGCATTCA AATTCCTGAA CGCGCTGCAG
ATCTTCAAAC TGGCGGTGAG CCTGGGCGGT ACAGAGTCGC TTGCCAGTCT GCCAGCAAGC
ATGACCCACT CCGGCGTGCC GGCTGACATC CGCCAAAAAA TTGGAATCCT CGATTCGACG
ATTCGACGAT TCGGCTGTCG ATTGGCGTCG AACACCCGTC CGATTTGA
|
|---|
| Protein sequence | MKPFPSKTHI GNHMLHPETL MLNYGYDPQL SEGAVKPPVF LTSTFVFRTA EDGQDYFDFV
SGRREPPEGQ GAGLVYSRFN HPNSEIVEDR FSVYERTDKC ALFSSGMSAI ATTILAFVRP
GDVILHSQPL YGGTETLFAK TLAGLSINAV GFADGVDEAA VSAVAQDATR KGRVAMIFTE
TPANPTNSLV DIAMVRRIAD TIGRAQGHTP LVVCDNTLLD VKALRGAIGT QLDPHSCWIL
SRSLETLSIR VEKADANARI VADCLLDHAK VAKVHYLGHL DEYSPAGHVF KRQCTGAGST
FSFDIVGGQA AAFKFLNALQ IFKLAVSLGG TESLASLPAS MTHSGVPADI RQKIGILDST
IRRFGCRLAS NTRPI
|
|---|
| |