| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Nham_1861 |
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| Symbol | |
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| ID | 4029947 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nitrobacter hamburgensis X14 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007964 |
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| Strand | - |
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| Start bp | 2075582 |
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| End bp | 2076523 |
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| Gene Length | 942 bp |
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| Protein Length | 313 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 637970333 |
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| Product | phage integrase |
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| Protein accession | YP_577135 |
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| Protein GI | 92117406 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG4974] Site-specific recombinase XerD |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.168133 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCTTGAAG TCGTTATCGA CCTGGCTCCT GCGGCGGCCG GCGCGAAAGC AGCGAACGAT
TCACCTTGGC CAACGCCATT ACCGTTCGAT CCCGATAGCA TGTTCTGGCT CGATAGTTTG
CTGCGCGGCG GCGCCTCACG GTCGACGATC GGCTGCTATG AGCGCGACAT CAGGCATGTC
TCTGCCGCTC TCGGAACGAA TGACGCCGCG GCGCTCACGC GCCTCAATCA GTCCGTACTC
GAATGCATCA CGAAATTCTG GACCGCGAAC GGCGCGGCGG AGTCAACCAT CTTTCGACGG
TTCTCCTCGC TGCGGAGTTT CGCCCGCTTC CTTATGCTCG AACGGTCCTA CGACTGCTCG
ACGCTGCTAA GCTCCCGCTT CCCGCCTAGC GGCAGAAACC GCAGAGAAGC CATTAGTGGC
GAAGCGATCG AAACGATACT CTCCTCCTCA ACGTGCGATT GGGACCATTC CTGGACGCGC
CTTCGCGATT GCGCTGTCGT CCAGTTGGCC GCGTCGTCCG GGCTCACAAC GGCTGAACTG
ACCGCGCTGA ACCGCCGCCA TTACGACGCT CGACTGGCGA AGGTCCGCGT GTGCGGCTCG
CACTTGCATA GCCGCCTCGG TATTGTCTCC CGCGAAGCCG CCCGTTGGTT GACGCGCTAT
CTCGACGAAG TGCCTTTCGA CCTCAGCCCG GGCGGCCCGC TCTTCGTTAC GACGCGACGC
ACCCGCCTCA GCGCACGATC GCTCCAGGCC TCGTTCCGGC GCTTGCGACA AACAGCAGGA
GTCTCCCGTC ACGCCGTGCC GAGCTCGTTA CGCAACGCCG TCGCCGAAAA GTTCGTGCGG
TCCGGTGCCA CACCCGAAGT CCTGGCCAAA GCCTTGGGAA TCGAGGTCTC GAGCGCGTGG
CGTTACTTCG ATGCGCGCGA CCGCGACATG GAACGACTCT GA
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| Protein sequence | MLEVVIDLAP AAAGAKAAND SPWPTPLPFD PDSMFWLDSL LRGGASRSTI GCYERDIRHV
SAALGTNDAA ALTRLNQSVL ECITKFWTAN GAAESTIFRR FSSLRSFARF LMLERSYDCS
TLLSSRFPPS GRNRREAISG EAIETILSSS TCDWDHSWTR LRDCAVVQLA ASSGLTTAEL
TALNRRHYDA RLAKVRVCGS HLHSRLGIVS REAARWLTRY LDEVPFDLSP GGPLFVTTRR
TRLSARSLQA SFRRLRQTAG VSRHAVPSSL RNAVAEKFVR SGATPEVLAK ALGIEVSSAW
RYFDARDRDM ERL
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