Gene Nham_1660 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNham_1660 
Symbol 
ID4032913 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrobacter hamburgensis X14 
KingdomBacteria 
Replicon accessionNC_007964 
Strand
Start bp1859867 
End bp1861327 
Gene Length1461 bp 
Protein Length486 aa 
Translation table11 
GC content67% 
IMG OID637970133 
Producthypothetical protein 
Protein accessionYP_576937 
Protein GI92117208 
COG category[S] Function unknown 
COG ID[COG5330] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATCGTTC GGCAGTTCAT CAGTTGGGTA CGGACCGCTC CCGCGGGCGA GCGGGCGGAA 
GCAACAAGAG CGCTGGCCCG CGCCTGGCTC ATATCGGATC TATCCGATGA CGATCGCGCG
GCCGCCGAGG GCGGGCTCCT GATGCAGCTC GATGACCCGT CGCCGCTGGT TCGGCAGGCG
ATGGCGGAGG TTTTTGCGCG CAGCGCGACC GCGCCGGCGG CGATCGTCCA GGCACTGTCG
GTCGATCAGC CTTCGGTTGC TATTTCGGTT CTCGAACATT CGCCGCTGCT GATCGATGCG
GACCTCGTCG ACATCGTCGC GACCGGTAGC TGCGAGGTGC AGTGCGCCGT CGCGCGCCGC
GCCCGTGTTC CGGTATCGGT CTGCGCCGCC ATCGCCGAGG TCGGCTCGGC GGCGGCGGCC
CTCGAACTCA TCGAAAATCC GGGCGCCGAT CTCGCGCCGC TGTCCTGGGC CCGGATCGTC
GAGCGGCACG GCCATCTCGC GGCGATTCGG GAATCGATGC TGGCGCTCGA CGATCTGCCC
GCGGCTACGC GGCTCGCGCT GGTCGCAAAG CTCTCAGATA CGCTGGCGCA GTTCGTCGTC
GCGCGGAACT GGCTCGGCGC CGATCGCGCC AGCCGCGCGG CCAGCGACGC CCGCGATCGC
TCCATCGTCA ACATCGCGGC GCGTGCGCGA GACGACGATA TGCGCGGTCT GGTCGCGCAC
CTGCGCGCCA CCGGGCAACT CACCGCCGGA TTGATCCTGC GCGCGCTGCT GTCGGGCAAT
CTCGACCTGT TCGATCATGC GCTGGTGGAA CTATCGGGCC TGCCCTTGAG CCGCGTCGCC
GCGCTGGTTC ACGATCGTGG CGGTGCGAGT CTGCCCGCGC TGCTGACGCG GGCAGGGCTG
CCGGAATCCA CCTTCCCTGC GTTTCGCGCC GCGCTGGAAG CGCGCGACGA GATCGGCTTT
GTGGGGACCG TCGGCGGTGC GACGCGGCTG CGCCGGCGCA TGGTCGAACG GGTCCTGACG
ATGTGCGAAA CGGCGCCCAC CGAGGTTTCG GAGCCTCTGC TGATCCTGCT GCGGCGCTTC
GCGACGGAAT CGGCGCGCGA GGAAGCGCGC GTGTTCTGTG ACGAACTGGT AGCCGAAGCG
GCTGCGGAGC CGGCGTATGA CGAAGTTGAC GAAGTGCCGG TTTGCGAGCC CGAGTTTTGC
GAGCCACAGT TCTGCGAGCC TCACTCATTC GAGCCTCCGC TCGATGAACC CGAGCCTCCC
GCAGTCGAAC CTTACGAGGC CGAGCCTTAC GCAATCGAGT CTTGCGAAAT CGAGTCTTGC
GAACGCGAGC GCCGCAAACC AAGGTTTGAT GAGCCCGTAT TTCACGAACC CCTGCGCCGC
GCACCAAGGT TTTACGAACC TGCGCCTTAT GAACCACGGC GCCGCGAGCC GCTGCTCAGC
GATCTGCTTG CGGCAGCGTA A
 
Protein sequence
MIVRQFISWV RTAPAGERAE ATRALARAWL ISDLSDDDRA AAEGGLLMQL DDPSPLVRQA 
MAEVFARSAT APAAIVQALS VDQPSVAISV LEHSPLLIDA DLVDIVATGS CEVQCAVARR
ARVPVSVCAA IAEVGSAAAA LELIENPGAD LAPLSWARIV ERHGHLAAIR ESMLALDDLP
AATRLALVAK LSDTLAQFVV ARNWLGADRA SRAASDARDR SIVNIAARAR DDDMRGLVAH
LRATGQLTAG LILRALLSGN LDLFDHALVE LSGLPLSRVA ALVHDRGGAS LPALLTRAGL
PESTFPAFRA ALEARDEIGF VGTVGGATRL RRRMVERVLT MCETAPTEVS EPLLILLRRF
ATESAREEAR VFCDELVAEA AAEPAYDEVD EVPVCEPEFC EPQFCEPHSF EPPLDEPEPP
AVEPYEAEPY AIESCEIESC ERERRKPRFD EPVFHEPLRR APRFYEPAPY EPRRREPLLS
DLLAAA