Gene Nham_1536 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNham_1536 
Symbol 
ID4030690 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrobacter hamburgensis X14 
KingdomBacteria 
Replicon accessionNC_007964 
Strand
Start bp1750642 
End bp1751778 
Gene Length1137 bp 
Protein Length378 aa 
Translation table11 
GC content64% 
IMG OID637970012 
Producthypothetical protein 
Protein accessionYP_576818 
Protein GI92117089 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG5653] Protein involved in cellulose biosynthesis (CelD) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.487265 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATCTCGG TAAACATTTG TTCACCAACA CCGGACATGG CGGCGCCGTG GGACGATCTC 
GTCCGGCGGG CCTCTTCCAA CGTGTTCATG AATCCGGTTG CCCTGACCGT CGCGAACGAG
ACCGGTTTCG CGCGCGTCCA GGTTCTGCTG GCGTGGGACA GCGCCGGACC CGGGAGGCTG
GTCGGCATCT GGGCCTTTCA GGTCCGCAGA ATTTCGCCGC TGTGGCCCGC GCTGCTTGAG
GCACTGCCTT ACAACTACGC CTTTCTCTCA AACCCGGTCG TCGATCCCGC CTATGTCGGC
GAGGTCATTC CGGCCTTCCT GTCGGCGATC CGCGACAGTT CCTTGTTACC CAAGGTGATC
AGTCTGAAGT CGCTCGATGC CGAGGCTCCG AGCTTCGAGA TGCTTGTGAA CGCGCTGAAG
GAGCAGGGAA GCACGCGGCT TAGGTTGACC GAGAGCACAC GGCCTTTCGC GACCCCGGAC
GTTGGCGTGA AACGGTCCGG CTCGACCCGG AAGAAGTTGC GGCAGGACTG GAACCGGCTC
TCCGGCGCGG GCGCGGTCGA TATCGTCAAC AACCGCGCGC CGGATACGCG AGAGGCGTTC
GAGACGTTCC TGAAGCTGGA AGCCGCAAGC TGGAAAGGAG CGCGTGGCAC GGCCTTGCTG
TGCAATGCCG CGGACGCGAC CTTCGCCAGA CAGATGGTCG CGGCGCTCGC CGAACGTGGC
AATGCCTCGG TGGCATTGCT GCGCGTCGAT GGCCGCGCTA TTGCCGCGCA GGTGCTGATG
TATTGCGGCA CCACGGCCTA CACCTGGAAA ACGGCATTCA GCTCGGACTA CGCAAAATAC
TCGCCGGGCG CGCTGCTGAT CGATAGGATC ACGGACGACC TGTTTTCCTC CGCCGGGGTC
GCGGAGATCG ATTCCTGTTC GTACGAGGGA AGCTTTATGG CTCAGCTCTG GGCCGGCCGC
CGGAAGATGG CCGATCTGCT CATCGATGTC GGGCCGGGTA AATCGCTGGC GTTTTCGCTG
GAGGCGATCC GCCAGCGGGG CTACGACCAG CTCCGCCGGC TTCGCGACCG GATTCGAACC
GGGGCGGTAC CGGCCGTACC CAAAAGCAAG AAGGTGAGTT TTGCCGCGCA TCGCTAG
 
Protein sequence
MISVNICSPT PDMAAPWDDL VRRASSNVFM NPVALTVANE TGFARVQVLL AWDSAGPGRL 
VGIWAFQVRR ISPLWPALLE ALPYNYAFLS NPVVDPAYVG EVIPAFLSAI RDSSLLPKVI
SLKSLDAEAP SFEMLVNALK EQGSTRLRLT ESTRPFATPD VGVKRSGSTR KKLRQDWNRL
SGAGAVDIVN NRAPDTREAF ETFLKLEAAS WKGARGTALL CNAADATFAR QMVAALAERG
NASVALLRVD GRAIAAQVLM YCGTTAYTWK TAFSSDYAKY SPGALLIDRI TDDLFSSAGV
AEIDSCSYEG SFMAQLWAGR RKMADLLIDV GPGKSLAFSL EAIRQRGYDQ LRRLRDRIRT
GAVPAVPKSK KVSFAAHR