| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Nham_1513 |
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| Symbol | |
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| ID | 4032412 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nitrobacter hamburgensis X14 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007964 |
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| Strand | + |
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| Start bp | 1719291 |
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| End bp | 1721870 |
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| Gene Length | 2580 bp |
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| Protein Length | 859 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 637969988 |
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| Product | TonB-dependent receptor |
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| Protein accession | YP_576795 |
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| Protein GI | 92117066 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG4774] Outer membrane receptor for monomeric catechols |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.691941 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGCAATG CAAGGATGCC GCGGTCGTTG CGGACGATCG CGGTGGCCGA TTCGATCGGC
AAGCCGTCGT TGGAAATCAG CTCCGTCGGC AAAGTCTCCA CCGTTGCAGG GCTCATCGCG
GTTGCCTCTT TCTCCGCCGC CGAAGCGCAG CAATCCAACC TCCCGCCGGT AACGATCGAT
GCCCCGGTCG TTCGCCCGCA TCATGCCAGG TCGAAGCCCA CGGCGGATCA TGTCCGGGCG
CGCACGGCAT TGCGCCGCGC CGCGCGCCGC GCTCAGCCGG CGCAGGTCGC GCCGGTGCCG
TTTCCCAATG CCGGCAACCT CGCGGCGGAT CGCAACCCAT ACGCGGACGC CGCCGCGCCC
TACAAGGTCG ATCACTTGCA GGCGTCCGGC AAGTTTCCGG AGCCGCTGCT GAACACGCCG
AAGACGGTCA CGGTGCTCAG CAAGGACGTG CTCGCGGACA AGGGCGCCAC CTTGCTCAAG
GATGTGGCGC GCACCACGGC TGGCGTCACC CTCGGCACCG GCGAGGGGGG CAACGCCTTC
GGCGATCGCT TCTTCATTCG CGGCTTCGAT GCGCGCAACG ACGTTTTCAT CGACGGTGTT
CGCGACCCCG GCGTCAGTGT CCGCGAGAAC TTCTTTACCG AGCAGGTGGA AATCCTGCGT
GGGCCGGGCT CGTCGTTCGC TGGCCGCGGT ACCACCGGTG GCGCGATCAA TATCGTGACC
AAGCAGGCCA CCACCGAAGG CAATTTTTAC AACATGGATA CGATGTTCGG CACCGACCAG
ACCAAGCGGG TGGTGCTCGA CGTCAATCAG GTCATCAGTC CGACATTGGC CGTTCGCGCC
GGCGGCCTGT TTCAGGACGC CAACGTCGCA GGCCGGAACT ACATCACCGA CGACCGCGGC
GGCGGTTTCC TGGCCGTGAC CTGGAAGCCG GTCGATGCCA TCAAGGTGCA GGCCAACTAT
ATCCACACCG ACCTGCATGG CCTTCCCGAC TTTGGCGTGC CGTATTTCCG GCCGAATAGT
GCACTTGTGG GAGGGTTCTA CAATTCAACC GCCGGCGGTC CGTTCCCGCA ATTCGGCCTC
AATCGCAACA CCTGGTATGG CTTCCTCAAT CGCGACTTCC AGTCCTACAG ACAGGACATC
GGCACGCTGA ACCTGGAAGC GCACATCACG CCCGACCTCA TGGTCACCAA CAAGACCCGC
GTGCAGCATT CCATTCTAAG TTATATCGGA ACGCTGCCGG AACGCCCGGT CGTGACCGAT
CCGAACCCTG CTAACTGGAC GCTCAGCGCC AATCCGCAGA GCCGCTTTCA GCCGACCAAC
GTCTTCGCCA ACCAGACCGA GGCGACCTAC AAATTCGGCA CCGGCCCGTG GCGCCACACC
GCACTCGCGG GCGTGGAAAT CTCGGCCGAG AGATCCAGTA TCGACAAGTA TTCGGGGTTG
AGTTCCGAAC AATTGCCCGG CGGCTTGAGC GGTACCGGCT CGGTTCCAGG CGTCAACATT
TTCAACCCGC AATTCACCAA CGCGTCGTTC CCGGAGCCGT CGCTCGCTGG GCTGCCGACC
AAAATCAATA TCGACACCAA GAGCGTCTAC CTGCTCGATA CCGCCAACTA CAACGACTTC
ATCATCCTCA ACGGTGGCAT CCGCTACGAC GACTACCACG TCAACACCAG CGGCTACGGC
ACGGTGAATG GTGTGTCGAA CGTGTTCGGC ACCCAGTCGC TGGATTCAGG TCTGACCAAC
TACAATCTCG GTGCGGTGGT AAAACCGCTG CCTAATGTCA GCCTCTATGC TGCCTATGCG
ACGTCGTCCA ATCCGGTCGG CGCCGAATTC GACGGCACCA GCGCTCAATA CGGCGGGCTC
GCGCCGATCC TCAACGGCAA CTCCAGTCAG ATATTCGGGC CGGAAAAGAA CCGCGCTGCC
GAAGTCGGCA CCAAGTGGGA ACTGTTCGAT CGTCATCTTC TGCTCCAGGC GTCGCTGTTC
CAGACCTGGA AGGACAACGC GCGCGAATCG CAGAACATCG CAAATGGGGG GGCGGCGACG
CCAACCTGTC CCTATCCCGC CGGATCCAGC GGTACGGTGT CCTGCATCAC CGCGGGCGCA
GCCTATTGGA TTCGCGGTAT CGACATTGAG GCTGCCGGCA AGATCACCGA CAAGTGGAGC
GTGTTTGGCG GCATCGTCCT GATGCAGTCG GAAGTAACGA AGTCGCTGGT CCCGTCGGCG
CAGCCGCTGC TTTATGCGAG CAATGTCGGC CTGCCGCTTG CCAATATCGC GCATCAGTCC
TTCAACGTAC TCACCAAGTA CCAGCTTACC GATGTCTGGG AAATCGGCGG GCAGGCGACC
TACCGCTCGC AGATCTACGG CGGCACCTTC CTTGCCGCCA ACCAGGGCAC TTCGCTGCCT
GACTACTGGC GTTTCGATGC GTTCGTCGAA GCCAAGGTCA ACAAGAACTG GCAGGTGAAG
CTCGCGGTGA ACAACATCAC CAATAAGCTC TACTACGACG CCTTGTATCA GAGTGCGACG
CCGTTCGTGT TCGTCGCGCC GGGCCGCGTC GCTTACTTGA CGCTGTCCGC TCGTTACTGA
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| Protein sequence | MSNARMPRSL RTIAVADSIG KPSLEISSVG KVSTVAGLIA VASFSAAEAQ QSNLPPVTID
APVVRPHHAR SKPTADHVRA RTALRRAARR AQPAQVAPVP FPNAGNLAAD RNPYADAAAP
YKVDHLQASG KFPEPLLNTP KTVTVLSKDV LADKGATLLK DVARTTAGVT LGTGEGGNAF
GDRFFIRGFD ARNDVFIDGV RDPGVSVREN FFTEQVEILR GPGSSFAGRG TTGGAINIVT
KQATTEGNFY NMDTMFGTDQ TKRVVLDVNQ VISPTLAVRA GGLFQDANVA GRNYITDDRG
GGFLAVTWKP VDAIKVQANY IHTDLHGLPD FGVPYFRPNS ALVGGFYNST AGGPFPQFGL
NRNTWYGFLN RDFQSYRQDI GTLNLEAHIT PDLMVTNKTR VQHSILSYIG TLPERPVVTD
PNPANWTLSA NPQSRFQPTN VFANQTEATY KFGTGPWRHT ALAGVEISAE RSSIDKYSGL
SSEQLPGGLS GTGSVPGVNI FNPQFTNASF PEPSLAGLPT KINIDTKSVY LLDTANYNDF
IILNGGIRYD DYHVNTSGYG TVNGVSNVFG TQSLDSGLTN YNLGAVVKPL PNVSLYAAYA
TSSNPVGAEF DGTSAQYGGL APILNGNSSQ IFGPEKNRAA EVGTKWELFD RHLLLQASLF
QTWKDNARES QNIANGGAAT PTCPYPAGSS GTVSCITAGA AYWIRGIDIE AAGKITDKWS
VFGGIVLMQS EVTKSLVPSA QPLLYASNVG LPLANIAHQS FNVLTKYQLT DVWEIGGQAT
YRSQIYGGTF LAANQGTSLP DYWRFDAFVE AKVNKNWQVK LAVNNITNKL YYDALYQSAT
PFVFVAPGRV AYLTLSARY
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