Gene Nham_1416 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNham_1416 
Symbol 
ID4032334 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrobacter hamburgensis X14 
KingdomBacteria 
Replicon accessionNC_007964 
Strand
Start bp1600912 
End bp1601673 
Gene Length762 bp 
Protein Length253 aa 
Translation table11 
GC content69% 
IMG OID637969890 
Productpeptidase S1 and S6, chymotrypsin/Hap 
Protein accessionYP_576698 
Protein GI92116969 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG5640] Secreted trypsin-like serine protease 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATTCAGC AATTCATTCG TACGCTCGCG GCCGTGACGG TCCTGACGCT GACGCAGCCC 
GTCTTCGCCA TGGTCGGCGG CGGCGGCGCG CCCTCGCCCG CGGTGGCGAA CGCGGTCGTC
ACCATCGTCG GCTCGCGCGG ATCGTCCTGC ACCGGCACGC TGATCGCGCG CGACATCGTT
CTCACCGCCG CGCACTGCAT CGCGCCCGGC GTCACCACCA AGTTGGTGGA TTACAAGAGT
CAACCGCCGC GCCTGCTCGA TATCCGGCGC ACCGCCACTC ATACGCAGTT CAACATGCAG
AGCCTGCTGG CGCATCGCGC CACCGCTGAT GTCGCGCTGT TGCAGCTTGC GTCGCCGCTC
TCCGCCTCTC CGGCAACGCT CGGCGGCGCG CTGATGCCTA TCACCGCAGG TCAGCGTCTT
ACTGTTGTCG GCATGGGCGT CGCGATCGCC GGCGACGGCC GTAGCGGCGG CGTGGCCCGC
GCCGCGAGCC TTTCCGTGAC CGGACGGCCC GGCACCTTGC AGATCCGCCT GGTCGATCCC
TCAACCAACA ATGCGCGCGC GGGCCTCGGC GCCTGTACCG GCGATTCCGG CGCACCGGCG
TTTCTCGATT CCAGCGGCGG CCCCGTCATC GCCGGCGTCG TGAGCTGGTC GACAGGTGCG
AACAACGCCG CGGGCTGCGG TGGCCTCACC GGCGTCACGC CGCTCGCGCT CTATCGCGAC
TGGATTTTGA AAACAGCAAG GAGTTGGGGC GCGGGGATTT AG
 
Protein sequence
MIQQFIRTLA AVTVLTLTQP VFAMVGGGGA PSPAVANAVV TIVGSRGSSC TGTLIARDIV 
LTAAHCIAPG VTTKLVDYKS QPPRLLDIRR TATHTQFNMQ SLLAHRATAD VALLQLASPL
SASPATLGGA LMPITAGQRL TVVGMGVAIA GDGRSGGVAR AASLSVTGRP GTLQIRLVDP
STNNARAGLG ACTGDSGAPA FLDSSGGPVI AGVVSWSTGA NNAAGCGGLT GVTPLALYRD
WILKTARSWG AGI