| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Nham_1396 |
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| Symbol | fliR |
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| ID | 4031887 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nitrobacter hamburgensis X14 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007964 |
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| Strand | + |
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| Start bp | 1580049 |
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| End bp | 1580819 |
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| Gene Length | 771 bp |
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| Protein Length | 256 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 637969870 |
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| Product | flagellar biosynthesis protein FliR |
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| Protein accession | YP_576678 |
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| Protein GI | 92116949 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1684] Flagellar biosynthesis pathway, component FliR |
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| TIGRFAM ID | [TIGR01400] flagellar biosynthetic protein FliR |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.401205 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGCACATCG ATATCTCGCT TCTGCCCGCC CTTGGCGCCG CTTTCATGCT GGTGTTTGCC
CGCATCGGCG CGATGGTGAT GTTGTTGCCG GGGTTTGGCG AGGTCTTCAT TCCGGTGCGG
GTCAAGCTCG CTATCGCGCT GCTTCTGACC CTCATCATCC TGCCGCTGCA TCGTTCGGCC
TATCACGTCG ACATGCAGTC GGTCGCACCG CTGGCGGTGT TGATGGTGCA TGAGATCATC
ATCGGCGTGG TGCTCGGCGC CACCGCGCGC GTCACGCTCG CGGCCTTGAG TGTGGCAGGC
TCGGTCATCG CACAGCAACT CGGACTCGGA TTCGTCACAT CGATCGATCC GACCCAGGGC
CAGCAAGGCG CGCTGATGGG CAACTTCCTG ACCCTTCTTG GCATCGCGCT GCTGTTCGCG
ACCGATACGC ACTATCTGGT CATCGCCGCG CTGAACGACA GCTACAAGAT TTTCTCGCCG
GGCGAACTGA TGCCGAGCGG CGACGTGGCG GCGCTGGCGA CGCGCGCCTT CGCCGCCGCT
TTCAAGATCG GCCTGCAACT GTCGGCGCCG TTTCTGGTAT TCGGGCTGGT CTTCAATATC
GGGCTTGGCG TGCTGGCGCG GCTGATGCCG CAGATGCAGG TCTATTTCGT CGGCGTGCCG
CTCTCGATAT TCATAGGCTT CGTGATCCTA GCCGCCGTGC TGGCATCCAT GATGGGAACC
TACATGGATT ACTTTATCGG CGTGATGCAC GACCTGACGC CGCTGAACTG A
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| Protein sequence | MHIDISLLPA LGAAFMLVFA RIGAMVMLLP GFGEVFIPVR VKLAIALLLT LIILPLHRSA
YHVDMQSVAP LAVLMVHEII IGVVLGATAR VTLAALSVAG SVIAQQLGLG FVTSIDPTQG
QQGALMGNFL TLLGIALLFA TDTHYLVIAA LNDSYKIFSP GELMPSGDVA ALATRAFAAA
FKIGLQLSAP FLVFGLVFNI GLGVLARLMP QMQVYFVGVP LSIFIGFVIL AAVLASMMGT
YMDYFIGVMH DLTPLN
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