| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Nham_1389 |
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| Symbol | |
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| ID | 4031880 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nitrobacter hamburgensis X14 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007964 |
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| Strand | + |
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| Start bp | 1572366 |
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| End bp | 1576175 |
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| Gene Length | 3810 bp |
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| Protein Length | 1269 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 637969863 |
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| Product | tetratricopeptide TPR_4 protein |
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| Protein accession | YP_576671 |
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| Protein GI | 92116942 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.184088 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGTGTGGA CGACTGCCGC TGGAAGTTGG TCGCAAGCGC GTGCCTGCGC GCGCCGGCTT
TGGCGCGGCC GTATTCCGGC GCTCGGCGTT GCGTTGTTGG TGCTCGCTGT GGCGTTTCCC
GATACCAGCC GCGCGCAGGC CGTCAAGGGC GAGGCGAGCT TTGCGGCGGC GAACGGTTTT
GCCCGTCTCG TCCTCAAGCT CGACGACGAC GTCGATTCCG AGGTGACGGT CGCGGGCACC
ATCCTTGTGA TCCACTTCAA GCGGCCGGTC GATATTCCCG TCGACAAGCT GTCGGACGCG
GTGCCGGACT ATGTCGGCTC GGCGCGCCGC GATCCCGACG GTTCGGCCAT TCGTCTGGCG
CTGGCGCGCA AGGTCAGCGT CAACACGATG ACGGCCGGCG AGCGCGTGTT CATCGATCTG
ATGCCCGATG GCTGGAAGGG GCCGCCGCCG GGATTGCCGC AGGAGGTGGT TCGCGAACTG
GCGGAGCGCG CCCGCGCCGC GGAGCGCGCC TTGCGCGAAC AGCGTACCCT GGAAGCGGCG
AAGAAGCGTC CGCCGGTTCG CGTGCGCGCT TCGGTGCAGC CGACCTTCGT GCGTTACGTT
TTCGAACTGC CCGACGGCGC CGGCGTGTCT TCCGTCCTCA ACGAGCAGAA GCTCGCGTTG
TTGTTCAAGC CGGCGCTGAC GTTCGACCTC GCCGACGCGA AGCTGGTGGC GCCGGCCAAC
GTCGCCTCGA TCGCACAGAA GGTCGAGGGT GACGGCTCGC GGATCGACGT CAAGCTGATC
GGCGATGTCG ATGTGCATTC GTTCCGCGAG GAGAAGAACT ACATCGTCGA TATCGGTTTC
CGGCAGGCCG ACAACCAGCC GGTGTTGCCG GTGCCGCTTG CATCGTCCGA AGCGCAACCG
GCGGAATCGG GGGCGAGGAA GCAGGCCAGC GCCGCTGCCG CGCCCGGCAA GTCCGCCGGG
ATTCCGCCGC CGACCTCGCA GACGATTGCC GAGCAGGCCG GGTTGACGGT CAAGCCCGCC
GCATCCCAGG TCAAATCCCC TGACGTCAAA TCTCCTGACG GCAAATCGGC GTCGGCGGCG
ACAACATCCG AACCGGCGCC GGCCGTCGCC GCACCCGTTG CGGCGGTTCA GCCTCCGGCC
GAAAAGCCTG CTGCTGCCGC CGCCGAAGCG CCGCCCGCGC CCATGCCGCC CGCGCCAATG
CCGAAGGTCG CCGCTTCGGA GGCGGTACCG GCAAAGGATA CACCGGCCAG GGATAGTCCC
GTCAAGCCGG ACCCCGCAAA GGTCGCGGCG TCAAAACCTG CGGCGTCGCC GGCGCCATCG
GCGGACGGGA TCGCCAATGA CGCCGTGACC CTCAACGCGG TCAGGCGCAG CGACGGCCTG
CGCCTGACGT TCGGCTTCAG CCAGCCGACG CCGGCGGCGC TGTTTCGCCG GGCCGATACG
GTGTGGCTGG TGTTCGACTC GGACAAGCCG ATCGACATCA GTGCGATCCG GAAGGAGGGT
GGATCGCTCA TCACCGACGT CGACCGCCGC CCCGTGGACA ACGGACAGGC GATCCGCATC
CGCCTGACCC GTCCGCAACT GGCCTCGCTC TCGGCCGGCG ATCCCGACGG CTCGGCACCC
GTCGCGCCGG GCCGGCGCTG GGAGGTGAGG TTCGCCGATG CCGTGCAGAA GCCGTTGCGC
GCGCTGACCG CGCAGCGGAA TGTCGTCGAT CGCATCCATG CGAGCGTCAC CATACCGCTC
GCGGGCACCG GCAGGCTGCA CCGGATCGTC GATCCCGACT CCGGCGGCGC CCTGATGGTC
GTCACCGCGC TACCGCCGGC GCAGGGTTTT GTCAGGCACC AGGAGTTCGT CGAGTTCTCG
CTGCGCGAGT CGACCCATGG CGTGGTGATC GGGCCGAAGG CCGACGATAT CGCCGTCGAG
ATAGCACCCG ACAAGGTCAC GGTGACCCGG CCCGGCGGTC TCACCTTGTC GGCGGCCAAT
GCCGGGCCCG AGCGCGGCGC GACCGCGGCA CGGCCGATCT TCGATGTCGA GGAGTGGCGG
AAGGACAGCG AGGCAAATTT CTTCCAGCGG CTCGACAAGC TGGTCGACGT GGCGTCGACG
GCGGGTGACG ACGACGCACG GACCGCGGCG CGGATCGATC TCGCCCGGTT CTACATGGCG
CGCGGCTTCT ATCACGAAGC CAAGGCGGTT CTCGACCTCG CGCTGTCCGA ACAGAACCCC
GGACAGGAAG ATCCGGTTCT GCTGATCGTT CACTCGGTAG CGAGTTCGCT GACGAATTAT
ACGGCGGCGG CGAGGCGGGA TCTCGCCAAT CCGGTGATTG GCGCCAACTA CGATTCCCAG
CTCTGGAAGG CGCTTGCGCT GGCGCGGCAG CACAAGTGGG CCGAGGCGCG GGAGAAGTTC
AAGAACGCCC AGTTCGCGAT CTCCGCGTTG CCGATCGATT TGCAGCGCCT GATCGTCGCC
GATGCGATGC GGGCGTCGCT TGAGGTCGGG GACTATTCCG GCACAGCGGC GCGCAGCGGC
GATCTCGACG TCATCGGCGT TCCCGACGAG ATGAAGCCCG CCATTACGGT CATGCGCGGA
CGGCTGTCGG AAGCGCTCGG GCGCGACAAG GACGCGCTTG CCCAATACAA GGAGGCGATG
GCCTCGCCGG ACCGTGAAGC CGCGGCTGAG GCGCAGATTC ACGACATCGC GTTGCGACAG
AAGCGCAACG AGATCAAGCC GGAGGAGGCG CTGCGCGATC TCGAAACGCT GTCGGTGATG
TGGCGCGGCG ACCGGCTGGA GGTGCAGACG CTGAAAATGC TGATGGCGCT CTACACCGAC
GCCGGCCGCT ATGCCGAGGC GCTGGCGGTC TCAAGGACCG CCACCAAACT GGAACCGGAC
TCCGCGGTGT CGCGCCAAAT TCAGGACGAC GCGTCGGCGC TGTTCTCCCA GCTCTTCCTC
AGTTCCAGAG GTGACAATCT TCCGCCGGTC GATGCGCTCG CGATGTTCTA TGACTATCGC
GATCTGACGC CGATCGGTCG CCGTGGCGAC GAAATGATCC GCCGGCTCGC TGATCGCCTG
GTCGGCGTCG ATCTGCTCGA TCAGGCGGGC GACCTCCTGC AATACCAGGT CGATCATCGG
CTGGAGGGCG CGGCGCGGGC GCAGGTCGCC GCGCGGCTTG CGATGGTCTA TCTGATGAAC
CGTAAGCCGG ACCGGGCGAT AGCTGCACTT CGCACCACGC GGATCGCCGA CCTCGCCGGC
GAATTACGCC AGCAACGTTT GCTGCTCGAA GCGCGCGCGG AGAGCGACAT CGGCCGCCGC
GATCTCGCCC TCGACATCAT CTCCAATCTC ACCGGGCGCG AGGCGATCCG CCTGCGCTCG
GATATCTACT GGGCGTCGCG GCGCTGGCGC GAGGCGTCCG AACAGATCGA GCTCTATTAC
GGCGAGCGCT GGCGCGACTT CAAACCGCTC ACCTCGAATG AGAAGGGTGA CATCATCCGC
GCCGTGATCG GCTATGCGCT CGCCGACGAT GCGCTGGGGC TTGGGCGCTT CCGCGAAAAA
TATGCGCCGC TGATGAGCGG CACCGCCGAC AAGCTCGCCT TCGATACCGC GAGCAAGCCC
GCCTCGGATA ACAGCGCCGA GTTCGAGCAG ATCGCCAGGA TGGCGGCGAA GGTCGATACG
CTCGACGGTT TCCTGCGCGA GATGAAATCG CGCTTTCCCG ACATGACGGC GAGGGCGCCG
CTGCCGCCGG AAGTGGCGAA GGCGGATTCC GCTCCCACGG GCGCGCTGCC GCAGATCGTG
GGACTAAAGC AGGTCGAGGC ATCGCGCTGA
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| Protein sequence | MVWTTAAGSW SQARACARRL WRGRIPALGV ALLVLAVAFP DTSRAQAVKG EASFAAANGF
ARLVLKLDDD VDSEVTVAGT ILVIHFKRPV DIPVDKLSDA VPDYVGSARR DPDGSAIRLA
LARKVSVNTM TAGERVFIDL MPDGWKGPPP GLPQEVVREL AERARAAERA LREQRTLEAA
KKRPPVRVRA SVQPTFVRYV FELPDGAGVS SVLNEQKLAL LFKPALTFDL ADAKLVAPAN
VASIAQKVEG DGSRIDVKLI GDVDVHSFRE EKNYIVDIGF RQADNQPVLP VPLASSEAQP
AESGARKQAS AAAAPGKSAG IPPPTSQTIA EQAGLTVKPA ASQVKSPDVK SPDGKSASAA
TTSEPAPAVA APVAAVQPPA EKPAAAAAEA PPAPMPPAPM PKVAASEAVP AKDTPARDSP
VKPDPAKVAA SKPAASPAPS ADGIANDAVT LNAVRRSDGL RLTFGFSQPT PAALFRRADT
VWLVFDSDKP IDISAIRKEG GSLITDVDRR PVDNGQAIRI RLTRPQLASL SAGDPDGSAP
VAPGRRWEVR FADAVQKPLR ALTAQRNVVD RIHASVTIPL AGTGRLHRIV DPDSGGALMV
VTALPPAQGF VRHQEFVEFS LRESTHGVVI GPKADDIAVE IAPDKVTVTR PGGLTLSAAN
AGPERGATAA RPIFDVEEWR KDSEANFFQR LDKLVDVAST AGDDDARTAA RIDLARFYMA
RGFYHEAKAV LDLALSEQNP GQEDPVLLIV HSVASSLTNY TAAARRDLAN PVIGANYDSQ
LWKALALARQ HKWAEAREKF KNAQFAISAL PIDLQRLIVA DAMRASLEVG DYSGTAARSG
DLDVIGVPDE MKPAITVMRG RLSEALGRDK DALAQYKEAM ASPDREAAAE AQIHDIALRQ
KRNEIKPEEA LRDLETLSVM WRGDRLEVQT LKMLMALYTD AGRYAEALAV SRTATKLEPD
SAVSRQIQDD ASALFSQLFL SSRGDNLPPV DALAMFYDYR DLTPIGRRGD EMIRRLADRL
VGVDLLDQAG DLLQYQVDHR LEGAARAQVA ARLAMVYLMN RKPDRAIAAL RTTRIADLAG
ELRQQRLLLE ARAESDIGRR DLALDIISNL TGREAIRLRS DIYWASRRWR EASEQIELYY
GERWRDFKPL TSNEKGDIIR AVIGYALADD ALGLGRFREK YAPLMSGTAD KLAFDTASKP
ASDNSAEFEQ IARMAAKVDT LDGFLREMKS RFPDMTARAP LPPEVAKADS APTGALPQIV
GLKQVEASR
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